OR5AK3P Olfactory Receptor
Gene Symbol | OR5AK3P1 (View this gene in GeneCards) |
Family | 5 |
Subfamily | AK |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | HsOR11.11.95 |
External Ids | HGNC: 15252 GeneBank: AB065497, NG_004212 |
Build #39 labels | OR5AK3 |
Chromosomal location | 11:56,971,050-56,971,976 (+) |
Cluster | 11@57 |
Synteny | CLIC#26 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR5AK1P | 83.12% | 308 |
OR5AK2 | 83.39% | 307 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR5AK7 | 79% | 308 |
Mouse | Or5ak24 | 76% | 308 |
Rat | Or5ak24 | 76% | 308 |
Cow | OR5AK7 | 79% | 307 |
Orang | OR5AK1 | 82% | 308 |
Horse | OR5AK35 | 79% | 308 |
Chimp | OR5AK3 | 99% | 298 |
Expression evidences
Source | Accession |
---|---|
GNF Atlas2 | gnf1h11096_at |
Sequence information
Nucleotide sequence |
ATGGGTCGAGGAAACAGCACTGAAGTGACTGAATTCCATCTTCTGGGATTTGGTGTCCAA CACGAATTTCAGCATGTCCTTTTCATTGTACTTCTTCTTATCTATGTGACCTCCCTGATA GGAAATATTGGAATGATCTTACTCATCAAGACCGATTCCAGACTTCAAACACCCATGTAC TTTTTTCCACAACATTTGGCTTTTGTTGATATCTGTTATACTTCTGCTATCACTCCCAAG ATGCTCCAAAGCTTCACAGAAGAAAATAATTTGATAACATTTCGGGGCTGTGTGATACAA TTCTTAGTTTATGCAACATTTGCAACCAGTGACTGTTACCTCCTAGCTATTATGGCAATG GATTGTTATGTTGCCATCTGTAAGCCCCTTCGCTATCCCATGATCATGTCCCAAACAGTC TACATCCAACTCGTAGCTGGCTCATATATTATAGGCTCAATAAATGCCTCTGTACATACA GGTTTTACATTTTCACTGTCCTTCTGCAAGTCTAATAAAATCAATCACTTTTTCTGTGAT GGTCTCCCAATTCTTGCCCTTTCATGCTCCAACATTGACATCAACATCATTCTAGATGTT GTCTTTGTGGGATTTGACTTGATGTTCACTGAGTTGGTCATCATCTTTTCCTACATCTAC ATTATGGTCACCATCCTGAAGATGTCTTCTACTGCTGGGAGGAAAAAATCCTTCTCCACA TGTGCCTCCCACCTGACAGCAGTAACCATTTTCTATGGGACACTCTCTTACATGTACTTA CAGCCTCAGTCTAATAATTCTCAGGAGAATATGAAAGTAGCCTCTATATTTTATGGCACT GTTATTCCCATGTTGAATCCTTTAATCTATAGCTTGAGAAATAAGGAAGGAAAATAAGCT TTAAAAGTGATAGGAAAAAAGTTTTGT |
Conceptual translation |
MGRGNSTEVTEFHLLGFGVQHEFQHVLFIVLLLIYVTSLIGNIGMILLIKTDSRLQTPMY FFPQHLAFVDICYTSAITPKMLQSFTEENNLITFRGCVIQFLVYATFATSDCYLLAIMAM DCYVAICKPLRYPMIMSQTVYIQLVAGSYIIGSINASVHTGFTFSLSFCKSNKINHFFCD GLPILALSCSNIDINIILDVVFVGFDLMFTELVIIFSYIYIMVTILKMSSTAGRKKSFST CASHLTAVTIFYGTLSYMYLQPQSNNSQENMKVASIFYGTVIPMLNPLIYSLRNKEGKX LKVIGKKFC Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 56,738,678 | 56,738,678 | SNP | A/G | rs7117365 (DbSNP) | |
11 | 56,738,965 | 56,738,965 | SNP | C/T | rs10501361 (DbSNP) | |
11 | 56,971,203 | 56,971,203 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
11 | 56,971,490 | 56,971,490 | SNP | C/T | 1000GP (CEU) | |
11 | 56,971,757 | 56,971,757 | SNP | A/G | 1000GP (CHBJPT) | |
11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
11 | 56,600,799 | 56,750,463 | CopyNumber | Variation_0148 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.