OR2AH1P Olfactory Receptor
| Gene Symbol | OR2AH1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | AH |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-203, HsOR11.11.86P, ORL3554 |
| External Ids | HGNC: 15144 GeneBank: AF399456, BK004600, NG_004244 ORDB: ORL3554 |
| Build #39 labels | OR2AH1P |
| Chromosomal location | 11:56,669,020-56,669,944 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR13D2P | 51.16% | 303 |
| OR2B8P | 49.33% | 298 |
| OR2G3 | 49.16% | 299 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2AH1 | 87% | 310 |
| Dog | OR2AH1B | 86% | 310 |
| Mouse | Or2ah1 | 84% | 310 |
| Rat | Or2ah1 | 83% | 310 |
| Cow | OR2AH1 | 82% | 310 |
| Orang | OR13D2 | 51% | 304 |
| Horse | OR2AH1 | 85% | 310 |
| Chimp | OR13D2 | 51% | 304 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB463983 |
| GNF Atlas2 | gnf1h10901_at |
Sequence information
| Nucleotide sequence |
ATGGAGTCAATAAACACAAACTTCACTGTCACTGAATTTGTGTTCCTGGGGTTGTCCTCT GAACCAAAGATACAGCTTATTCTTTTTATTATGTTCTTGTTCTATTTATCAACGGTGGCT GGAAATGTTATAATCATCACTATTATCTAGATGGAACCTCTCCTCCAAACCCCCATGTAC TTCTTCCTCACTAATTTATCCTTTCTGGACATTTGCTACACATCCACCAATGTCCCCCAA ATGCTGTCCAACATGGCGGGGAAAAAGAACACCATCTCATTCTCCAGCTGCGCTACTCAG ATGTACTTCTCCCTCTCCTTTGGAATGATTGTGTCCTCCTTGGTGTCATGGCTTATGACA GATATGTAGCCATTTGTCATCCTCTTCATTATACCTTCATTATGGACCAAAACACCTGCA TTCAACTGGCAGTTATTTCTTGGTCCAGTAGCTTCCTGAGTTCCATGGTTATCAATGTTC TCACGTTGAGTTTGCCCTACTGTGGGCCTAATATCCTGAATCACTTTTTCTGTGAGGTAC TTTCTGTCCTGAGGTTGGCTTGCACCAACACCTCATTCACAGAGCTGGTTGTTTTTATCT TCAGTATCATCATTGTCTTCATCCCTTTCCTCCTCATTGTTGTTTCCTATGTCCGGATCC TTCAATCTGTTCTCAGGATGCGGTCAGCCTCTGGGCGGTATCAGGCATTATCCACCTGTA CCTCCCATTTGACAGTGGTAACCTTATTTATGGGACTGCCATCTTCATGGACATGAGACC ACAGTCGAGGTCCTCCTGGGCTGGCGGCAAGATCATTGCGGTTTTCTACACGGTGGTCAC ACCCATGCTTAACCCCTTGATTTACAGCCTGAGGAACCAAGATGTGAAAGGAGCTCGAAG GAGAGCTATTGCAAAGCAGAGGATG |
| Conceptual translation |
MESINTNFTVTEFVFLGLSSEPKIQLILFIMFLFYLSTVAGNVIIITIIXEPLLQTPMY FFLTNLSFLDICYTSTNVPQMLSNMAGKKNTISFSSCATQMYFSLSFG/DCVLLGVMAY DRYVAICHPLHYTFIMDQNTCIQLAVISWSSSFLSSMVINVLTLSLPYCGPNILNHFFCE VLSVLRLACTNTSFTELVVFIFSIIIVFIPFLLIVVSYVRILQSVLRMRSASGRYQALST CTSHLTVVTL/YGTAIFMDMRPQSRSSWAGGKIIAVFYTVVTPMLNPLIYSLRNQDVKG ARRRAIAKQRM Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 56,436,602 | 56,436,602 | SNP | A/G | rs61903343 (DbSNP) | |
| 11 | 56,436,733 | 56,436,733 | SNP | A/G | rs61903345 (DbSNP) | |
| 11 | 56,436,634 | 56,436,634 | SNP | C/T | rs61903344 (DbSNP) | |
| 11 | 56,669,126 | 56,669,126 | SNP | G/A | 1000GP (CEU) | |
| 11 | 56,669,158 | 56,669,158 | SNP | C/T | 1000GP (CEU) | |
| 11 | 56,669,257 | 56,669,257 | SNP | G/A | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 101 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.