OR4K6P Olfactory Receptor
| Gene Symbol | OR4K6P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | K |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-11, HsOR14.1.8P, ORL3706 |
| External Ids | HGNC: 14748 GeneBank: BK004626, NG_002240 ORDB: ORL3706 |
| Build #39 labels | OR4K6P |
| Chromosomal location | 14:19,847,367-19,848,305 (+) |
| Cluster | 14@20b |
| Synteny | CLIC#32 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4K12P | 93.27% | 312 |
| OR4K7P | 94.23% | 312 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4K6 | 88% | 314 |
| Mouse | Or4k6 | 85% | 314 |
| Rat | Or4k6 | 86% | 314 |
| Cow | OR4K6 | 89% | 314 |
| Orang | OR4K2 | 67% | 314 |
| Horse | OR4K6 | 89% | 314 |
| Chimp | OR4K6 | 98% | 314 |
Sequence information
| Nucleotide sequence |
ATGGAGGGGTTCAACTGTTCCAGAGTATCTGAATTCATGTTACTTGGACTTACTGATTCT CCTGAACTCCAGAGATTCTTTTTTGTGGTATTTTCTGTCTTCTATTTAATGACCATGTTG GGCAACTGCCTGATTTTGCTCACTGTGCTATCCACCTCACACCTTCACTCTCCCATGTAC TTCCTGCTCAGCAACCTGTCTCTCATTGACATGTGCCTGTCCTCCTTTGCCACACCAAAG ATGATTATGGACTTTTTTGCTCTGCGTAAGACCATCTCTTTTGAAGGCTGCATTTCTCAG ATCTTTTTTTGCACCTCTTCACCGGGACTGAGATTGTGCTGCTGATCTCCATGTCTTTTG ACAGGTATATTGCCATATGTAAACCTCTCCATTATTCAACAATTATGAGCCAAAGAGTGT GTGTTGAGCTTGTGGCCGTTTCTTGGACAGTGGGCTTTCTGCATACAATGAGCCAATTAG CTTTTACCCTCTATTTGCCCTTCTGTGGTCCCAATGTTGTAGAGTTTTTTCTGTGATCTT CCTTTGGTCATCCAGCTAGCTTGTATGGATATTTATGTTCTTGGGATCTTCATGATTTCA ACCAGTGGTGTGATTGCTCTTATAAGTTTTCTGCTTTTGCTCACCTCCTACATCATTGTT CTTATTACTGTCAGGGACTACTCCTCCACAGGATCCTCCAAGGCTCTTTCTACCTGTACA GCACATTTTATTGTTGTGTTAATGTTCTTTGGGCCCTGTATTTTCATTTATGTGTGGCCT TCCACAAACTTCCTGGTAGACAAAATTCTCTCTGTTTTCTATACCATCTTCACTCCCTTT CTGAATCCACTTATCTATACTTTGAGAAACCAGGAAGTGAAGACAGCAATGAAGAAGAAA CTGAATATTCAGTATTTCAGTCTTGGGAAAACTGCTCCG |
| Conceptual translation |
MEGFNCSRVSEFMLLGLTDSPELQRFFFVVFSVFYLMTMLGNCLILLTVLSTSHLHSPMY FLLSNLSLIDMCLSSFATPKMIMDFFALRKTISFEGCISQIF/LHLFTGTEIVLLISMS FDRYIAICKPLHYSTIMSQRVCVELVAVSWTVGFLHTMSQLAFTLYLPFCGPNVV\FFC DLPLVIQLACMDIYVLGIFMISTSGVIALISFLLLLTSYIIVLITVRDYSSTGSSKALST CTAHFIVVLMFFGPCIFIYVWPSTNFLVDKILSVFYTIFTPFLNPLIYTLRNQEVKTAMK KKLNIQYFSLGKTAP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 20,315,836 | 20,315,835 | Ins(1) | -/T | rs36026276 (DbSNP) | |
| 14 | 20,315,829 | 20,315,828 | Ins(1) | -/T | rs71431987 (DbSNP) | |
| 14 | 20,316,049 | 20,316,048 | Ins(2) | -/CA | rs35667334 (DbSNP) | |
| 14 | 20,315,962 | 20,315,962 | SNP | A/C | rs4983256 (DbSNP) | |
| 14 | 20,316,092 | 20,316,092 | SNP | A/G | rs8010849 (DbSNP) | |
| 14 | 20,316,038 | 20,316,038 | SNP | A/G | rs8014458 (DbSNP) | |
| 14 | 20,316,144 | 20,316,144 | SNP | C/G | rs11848816 (DbSNP) | |
| 14 | 20,316,036 | 20,316,036 | SNP | T/C | rs1986487 (DbSNP) | |
| 14 | 20,316,128 | 20,316,128 | SNP | T/C | rs1986486 (DbSNP) | |
| 14 | 19,847,803 | 19,847,803 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 14 | 19,847,877 | 19,847,877 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 14 | 19,847,879 | 19,847,879 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 14 | 19,847,969 | 19,847,969 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 14 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 20,197,616 | 20,399,048 | CopyNumber | Variation_0316 (DGV) |
| 14 | 20,203,125 | 20,539,108 | CopyNumber | Variation_3036 (DGV) |
| 14 | 19,662,531 | 20,556,187 | CopyNumber | Variation_3929 (DGV) |
| 14 | 20,219,649 | 20,415,445 | CopyNumber | Variation_4826 (DGV) |
| 14 | 19,117,183 | 20,424,605 | CopyNumber | Variation_7028 (DGV) |
| 14 | 20,203,125 | 20,483,660 | CopyNumber | Variation_8762 (DGV) |
| 14 | 20,203,125 | 20,626,160 | CopyNumber | Variation_8763 (DGV) |
| 14 | 20,239,479 | 20,422,583 | CopyNumber | Variation_8764 (DGV) |
| 14 | 20,203,125 | 20,716,841 | CopyNumber | Variation_8765 (DGV) |
| 14 | 20,203,125 | 20,433,044 | CopyNumber | Variation_9234 (DGV) |
| 14 | 20,239,479 | 20,511,107 | CopyNumber | Variation_9235 (DGV) |
| 14 | 20,177,234 | 20,424,604 | CopyNumber | Variation_30648 (DGV) |
| 14 | 19,360,239 | 20,424,604 | CopyNumber | Variation_31953 (DGV) |
| 14 | 20,203,125 | 20,525,833 | CopyNumber | Variation_34547 (DGV) |
| 14 | 20,267,014 | 20,433,060 | CopyNumber | Variation_34563 (DGV) |
| 14 | 20,203,125 | 20,456,434 | CopyNumber | Variation_34575 (DGV) |
| 14 | 20,203,125 | 20,655,466 | CopyNumber | Variation_34656 (DGV) |
| 14 | 20,239,246 | 20,432,988 | CopyNumber | Variation_34659 (DGV) |
| 14 | 20,203,125 | 20,550,348 | CopyNumber | Variation_34660 (DGV) |
| 14 | 20,203,125 | 20,455,307 | CopyNumber | Variation_34664 (DGV) |
| 14 | 19,670,757 | 20,331,117 | CopyNumber | Variation_37621 (DGV) |
| 14 | 20,200,183 | 20,423,372 | CopyNumber | Variation_38951 (DGV) |
| 14 | 20,305,431 | 20,404,091 | CopyNumber | Variation_49301 (DGV) |
| 14 | 20,305,431 | 20,425,051 | CopyNumber | Variation_49302 (DGV), Variation_49303 (DGV) |
| 14 | 20,305,431 | 20,432,664 | CopyNumber | Variation_49304 (DGV) |
| 14 | 19,349,922 | 20,424,856 | CopyNumber | Variation_58655 (DGV) |
| 14 | 20,177,210 | 20,424,753 | CopyNumber | Variation_66584 (DGV) |
| 14 | 19,781,170 | 20,424,776 | CopyNumber | Variation_71833 (DGV) |
| 14 | 20,289,680 | 20,425,312 | CopyNumber | Variation_71860 (DGV) |
| 14 | 20,152,622 | 20,419,574 | CopyNumber | Variation_76554 (DGV), Variation_87112 (DGV) |
| 14 | 20,283,374 | 20,419,574 | CopyNumber | Variation_76556 (DGV) |
| 14 | 20,299,695 | 20,419,574 | CopyNumber | Variation_87113 (DGV) |
| 14 | 20,201,654 | 20,343,302 | CopyNumber | Variation_87118 (DGV) |
| 14 | 20,315,426 | 20,318,464 | CopyNumber | #157 (Waszak) |
| 14 | 20,316,432 | 20,316,602 | Del(-10) | #20(modil) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.