OR51A10P Olfactory Receptor
Gene Symbol | OR51A10P1 (View this gene in GeneCards) |
Family | 51 |
Subfamily | A |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | OR11-42, HsOR11.3.67P, ORL3567 |
External Ids | HGNC: 15185 GeneBank: BK004683, NG_004229 ORDB: ORL3567 |
Build #39 labels | OR51A10P, OR51A11P, OR51A13 |
Chromosomal location | 11:5,468,504-5,469,359 (-) |
Cluster | 11@5 |
Synteny | CLIC#23 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR51G2 | 52.8% | 286 |
OR51I1 | 56.94% | 281 |
OR51I2 | 59.93% | 282 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR51A10 | 86% | 288 |
Mouse | Or51a10 | 85% | 289 |
Rat | Or51a10 | 86% | 289 |
Cow | OR51A10 | 85% | 289 |
Orang | OR51A42P | 71% | 285 |
Horse | OR51A10 | 83% | 288 |
Chimp | OR51A10 | 97% | 258 |
Expression evidences
Source | Accession |
---|---|
ESTs | BF132682 |
mRNA | BC022184 |
Sequence information
Nucleotide sequence |
ATGAAGGGTCTGGAGCACTGGCTGGCTGCCCTTCTGCTGCTGCTTTGTGCTATTTCCTTC CTGGGCAACATCCTCATCCTCTTTATCATAAAGGAAGAGCAGAGCTTGCACCAGCCAATG TACTACTTCCTGTCTCTTTTTTCTGTTAATGACCTGGGTGTGTCCTTTTCTACATTGCCC ACTGTACTGGCTGCTGTGTGTTTTCATGCCCCAGAGACAACTTTTGATGCCTGCCTGGCC CAGACGTTCTTCATCCACTTTTCCTCCTGGACAGAGTTTGGCATCCTACTGGCCATGAGT TTTGACCACTATGTGGCCATCTGTAACCCGCTGCGCTATGCCACAGTGCTCACTGATGTC CGTGTGGCCCACAATGGCATATCCATTGTCATCCGCAGCTTCTGCATGGTATTCCCACTT CCCTTCCTCCTGAAGAGACTGCCTTTCTGTAAGGCCAGTGTGGTACTGGCCCATTCCTAC TGTCTGCATGCAGACCTGATTCGGCTGCCCTGTGGAGACACTACCATCAACAGCATGTAT GGCCTGTTCATTGTCATCTCTGCCTTTGGTGTAGATTCACTGCTCATCCTCCTCTCCTAT GTGCTCATTCTACATTCTGTGCTGGCCATTGCCTCCAGGGGTGAGAGGCTTAAGACACTC AACACATGTGTGTCACATATCTATGCAGTGCTGATCTTCTATGTGCCTATGGTTAGTGTG TCCATGGTTCATCGATTTGGGAGGCATGCTCCTGAATATGTGCACAAGTTCATGTCTCTT TGTACCTCCAATGCTCTACCCAATTATCTATTCCATCAAGACTAAGGAGATTCGCAGGAG ACTACACAAGATGTTA |
Conceptual translation |
MKGLEHWLAALLLLLCAISFLGNILILFIIKEEQSLHQPMYYFLSLFSVNDLGVSFSTLP TVLAAVCFHAPETTFDACLAQTFFIHFSSWTEFGILLAMSFDHYVAICNPLRYATVLTDV RVAHNGISIVIRSFCMVFPLPFLLKRLPFCKASVVLAHSYCLHADLIRLPCGDTTINSMY GLFIVISAFGVDSLLILLSYVLILHSVLAIASRGERLKTLNTCVSHIYAVLIFYVPMVSV SMVHRFGRHAPEYVHKFM/S/VPPMLYPIIYSIKTKEIRRRLHKML Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
11 | 5,468,847 | 5,468,847 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
11 | 5,468,925 | 5,468,925 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
11 | 5,468,952 | 5,468,952 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
11 | 5,469,115 | 5,469,115 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
11 | 5,469,241 | 5,469,241 | SNP | A/G | 1000GP (CEU) | |
11 | 5,469,249 | 5,469,249 | SNP | G/A | 1000GP (CHBJPT) | |
11 | 5,469,299 | 5,469,299 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
11 | 5,469,313 | 5,469,313 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
11 | 5,489,927 | 5,489,927 | SNP | G/A | rs61748001 (DbSNP) | |
11 | 5,489,965 | 5,489,965 | Del(1) | -/C | rs35984509 (DbSNP) | |
11 | 5,490,077 | 5,490,077 | SNP | C/A | rs2736569 (DbSNP) | |
11 | 5,490,118 | 5,490,118 | Del(1) | -/G | rs35709721 (DbSNP) | |
11 | 5,490,155 | 5,490,155 | SNP | C/G | rs7925620 (DbSNP) | |
11 | 5,490,159 | 5,490,159 | SNP | A/G | rs7940178 (DbSNP) | |
11 | 5,490,182 | 5,490,182 | SNP | C/T | rs17297010 (DbSNP) | |
11 | 5,490,345 | 5,490,345 | SNP | G/A | rs449937 (DbSNP) | |
11 | 5,490,372 | 5,490,372 | SNP | T/G | rs61738627 (DbSNP) | |
11 | 5,490,408 | 5,490,408 | SNP | A/G | rs55679555 (DbSNP) | |
11 | 5,490,454 | 5,490,453 | Ins(1) | -/A | rs58849486 (DbSNP) | |
11 | 5,490,471 | 5,490,471 | SNP | G/A | rs61743063 (DbSNP) | |
11 | 5,490,472 | 5,490,472 | SNP | T/C | rs61741554 (DbSNP) | |
11 | 5,490,529 | 5,490,529 | SNP | A/G | rs10768978 (DbSNP) | |
11 | 5,490,543 | 5,490,543 | SNP | T/C | rs366257 (DbSNP) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
11 | 5,416,622 | 5,492,033 | CopyNumber | Variation_2901 (DGV) |
11 | 5,431,984 | 5,493,309 | CopyNumber | Variation_9174 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.