OR51A1P Olfactory Receptor
| Gene Symbol | OR51A1P1 (View this gene in GeneCards) |
| Family | 51 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HPFH6OR, OR11-35, HsOR11.3.52P, ORL506 |
| External Ids | HGNC: 8316 GeneBank: AY284453-AY284484, BK004750, NG_002199 ORDB: ORL506 |
| Build #39 labels | OR51A1P |
| Chromosomal location | 11:5,170,354-5,171,223 (-) |
| Cluster | 11@5 |
| Synteny | CLIC#23 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR51G2 | 53.57% | 280 |
| OR51I2 | 50.72% | 278 |
| OR51K1P | 57.34% | 286 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR51A1 | 82% | 289 |
| Mouse | Or51k2 | 66% | 286 |
| Rat | Or51k7 | 67% | 287 |
| Cow | OR51A61P | 71% | 278 |
| Orang | OR51A1 | 91% | 290 |
| Orang | OR51A1BP | 92% | 283 |
| Horse | OR51K5 | 69% | 287 |
| Chimp | OR51A1 | 93% | 290 |
Sequence information
| Nucleotide sequence |
ATGTGGATATCCATCCCCTTCTGCCTGATATACACCATCATCTTTCCGGGAAATGGCATC ATTCTTCACATCATCCGAATTGACTCTTCCTTGCACCAACCCATGTACTATTTTCTGGCC ATGCCGGCCTTTGTTGAACTTGGTGTCTCTGCTTCCACCATGCCCACTGTGTTAAGCATA TTCCTCTTTGGCATTAACGATGTCAGTTTTGGTGGTTGCCTGCTCCAGATGTTTTCTATG CACTCTTTCACTCTTATGGAGTCAGGTGTCCTTCTGGCAATGTCAGTGGACCGCTTTGTG GCCATCTACAGCCCACTGCGCTACACAACCATTCTGACAATTGCCTGCATTTCTGGGACG GGTGCCGCCATTGCCTTGCGCAGTGTAATGCTTATGCTCCCACTGCTCTTTCTCCTGAGG CGTCTGCCTTTCTGTGGCCACAATACCCTCACACACTCTTATTGCCTCCACTCAGATCTG ATCAAATTGCCCTGTGGAGACACACGTCCCAATAGCATCCTGGCTCTATTTGTCATTACC TTCACATTTGGACTGGACTTATTGTTCATTGTGGTTTCTTATGTGCTGATTCTTCATACA GTACTGGAAATAGCTTCTGGAGCAGGGCGGTGGCAGGCACTCAACACATGTGTGTCGCAC ATATGTGCTGTGCTTGTGTACTATGTGCCCATGATCAGCCTCTCCCTGATGCACCGCTTT GGACGGCATTTACCTCCACTTTTCCAGACTGTCACGGCCAATGCTTACCTCTTTTTTCCT CCTGTGGTCAACCCCATTGTCTATAGTATCAAAATCAAAGAAATTCGCAACAGCGTTGTT CTTACACTATCCAGGAAGAGGGGTGAGTTC |
| Conceptual translation |
MWISIPFCLIYTIIFPGNGIILHIIRIDSSLHQPMYYFLAMPAFVELGVSASTMPTVLSI FLFGINDVSFGGCLLQMFSMHSFTLMESGVLLAMSVDRFVAIYSPLRY\PFXLPAFLG RV/AIALRSVMLMLPLLFLLRRLPFCGHNTLTHSYCLHSDLIKLPCGDTRPNSILALFV ITFTFGLDLLFIVVSYVLILHTVLEIASGAGRWQALNTCVSHICAVLVYYVPMISLSLMH RFGRHLPPLFQTVTANAYLFFPPVVNPIVYSIKIKEIRNSVVLTLSRKRGEF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 5,191,680 | 5,191,680 | SNP | A/G | rs10160707 (DbSNP) | |
| 11 | 5,191,947 | 5,191,947 | SNP | A/G | rs7478693 (DbSNP) | |
| 11 | 5,192,095 | 5,192,095 | SNP | A/G | rs7481262 (DbSNP) | |
| 11 | 5,192,015 | 5,192,015 | SNP | C/G | rs73396897 (DbSNP) | |
| 11 | 5,192,074 | 5,192,074 | SNP | C/T | rs73396898 (DbSNP) | |
| 11 | 5,170,450 | 5,170,450 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 5,170,642 | 5,170,642 | SNP | A/G | 1000GP (CEU) | |
| 11 | 5,170,717 | 5,170,717 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 5,170,865 | 5,170,865 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.