OR7A15P Olfactory Receptor
| Gene Symbol | OR7A15P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | CIT-HSP-87m17, OR19-1, OR19-134, OR19-146, HsOR19.3.10P, ORL3792 |
| External Ids | HGNC: 8361 GeneBank: AB065579, AF399435, NG_002311, U86253 ORDB: ORL3792 |
| Build #39 labels | OR7A20P, OR7A15P |
| Chromosomal location | 19:14,927,052-14,928,057 (+) |
| Cluster | 19@15a |
| Synteny | CLIC#45 |
| Remarks | Disrupted by SnRNA repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A10 | 74.09% | 328 |
| OR7A17 | 74.7% | 328 |
| OR7A5 | 70.57% | 333 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7A53 | 72% | 332 |
| Mouse | Or7a36 | 70% | 329 |
| Rat | Or7a41 | 70% | 328 |
| Cow | OR7A53 | 72% | 334 |
| Orang | OR7A15 | 88% | 328 |
| Horse | OR7A96 | 75% | 322 |
| Chimp | OR7A10 | 74% | 328 |
Sequence information
| Nucleotide sequence |
ATGGAACCAGAGAATGATACACGAATTTCAGAATTTCGACTTCTGGGATTTTCAGAAGAA CCCAGACTGCAACGATTTCTCTTTGGTAAAAGGCAAAAGATTTATACAATTTGAAGAGAA ACCAGAGCATAACGATTTCTCTTTGGAGTGTTCTTATCCATGTACCTCATCATTGTATTT GGAAACTTGCTTATCATCCTGGTTATCATTTTATGCTCCCACCTCCACACCTCCATGTAC TTCTTTCTCTCCAACCTGTCCTTTGTAGACATCTGTTTTGCCTCCACCAGGGTCCCAAAG ATGCTGGTGAATATCCAGGCACAGAGCAAAGTCATCACCTCTGCAGGCTGCATCACCCAG ATGTACTTTTTCATACATTTTGTAGGATTGGACAGCTTCCTCCTGACTGTGATGGCCTAT GACCGGTTTGTGGCCATCTGTCACCCCCTGTACTACACGGTCATCATGAACCCTCAACTC TGTGGATTGCTGGTTCTGGTATCCTGGATCACAAGTGTCTTGCATTCCTTATTACATAGC TTAATGGTGCTGCAGTTGTCCTTATGCAGAGAGTTGGAAATCCCCCACTTTTTCTGTGAA CTTAATCAGGTCATCCACCTTGCCTGTTCTGACACCTTTCTTAATGACATGGTGATGTAT CTGGCAGCTGTGCTGCTGGGTGGGGGGATGTCTCGCTGGGATCCTTTACTCTTACTCTAA GATAGTTTCCTCCATATGTGCAATCTCATCAGCTCAAGGGAAGTATAAGGCATTTTCCAC CTGTCCGTCTCACCTCTCAGTTGTCTCCTTGTTTTACTGTACAAGCCTAGGAGTGTACCT TAGCTCGGCTGCATCCCACAACTCACACTCAGGTGCAATAGCCTCAGTGAGGTACACTGT GGTCACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGGAATAAGGACATAAAGAGGGC TCTGAAGAATTCTTTGGGAGGGAAACTAGAAAAGGGCCAGTTGTCC |
| Conceptual translation |
MEPENDTRISEFRLLGFSEEPRLQRFLFGKRQKIYTIXETRAXFLFGVFLSMYLIIVF GNLLIILVIILCSHLHTSMYFFLSNLSFVDICFASTRVPKMLVNIQAQSKVITSAGCITQ MYFFIHFVGLDSFLLTVMAYDRFVAICHPLYYTVIMNPQLCGLLVLVSWITSVLHSLLHS LMVLQLSLCRELEIPHFFCELNQVIHLACSDTFLNDMVMYLAAVLLGGG\LAGILYSYS KIVSSICAISSAQGKYKAFSTCPSHLSVVSLFYCTSLGVYLSSAASHNSHSGAIASVRYT VVTPMLNPFIYSLRNKDIKRALKNSLGGKLEKGQLS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) | |
| 19 | 14,927,283 | 14,927,283 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 14,927,469 | 14,927,469 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 14,927,543 | 14,927,543 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 19 | 14,927,774 | 14,927,774 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 14,927,838 | 14,927,838 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 19 | 14,927,942 | 14,927,942 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 19 | 15,038,095 | 15,038,095 | SNP | C/T | rs1811200 (DbSNP) | |
| 19 | 15,038,135 | 15,038,135 | SNP | A/T | rs8106971 (DbSNP) | |
| 19 | 15,038,281 | 15,038,281 | SNP | C/T | rs58141718 (DbSNP) | |
| 19 | 15,038,288 | 15,038,288 | SNP | G/T | rs61744536 (DbSNP) | |
| 19 | 15,038,355 | 15,038,355 | SNP | G/T | rs4808693 (DbSNP) | |
| 19 | 15,038,586 | 15,038,586 | SNP | C/T | rs4808694 (DbSNP) | |
| 19 | 15,038,650 | 15,038,650 | SNP | A/G | rs1985557 (DbSNP) | |
| 19 | 15,038,754 | 15,038,754 | SNP | T/G | rs2366860 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 19 | 15,037,764 | 15,040,869 | Deletion | #247 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.