OR7E2P Olfactory Receptor
Gene Symbol | OR7E2P1 (View this gene in GeneCards) |
Family | 7 |
Subfamily | E |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | hg94, OR11-6, HsOR11.17.2P, ORL3640 |
External Ids | HGNC: 8402 GeneBank: AF065857, AF399424, NG_002166 ORDB: ORL3640 |
Build #39 labels | OR7E2P |
Chromosomal location | 11:86,857,034-86,858,011 (-) |
Cluster | 11@87 |
Synteny | CLIC#0 |
Remarks | Disrupted by STR1 repeat |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR7E100P | 85.44% | 309 |
OR7E102P | 83.12% | 314 |
OR7E111P | 83.17% | 309 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR7E153 | 73% | 294 |
Mouse | Or7e178 | 69% | 295 |
Rat | Or7e176 | 64% | 300 |
Cow | OR7E185P | 70% | 293 |
Orang | OR7E100P | 85% | 297 |
Orang | OR7E111P | 82% | 297 |
Orang | OR7E102 | 82% | 295 |
Horse | OR7E220 | 71% | 295 |
Chimp | OR7E100P | 85% | 289 |
Chimp | OR7E111P | 82% | 297 |
Expression evidences
Source | Accession |
---|---|
ESTs | AW514861 |
GNF Atlas2 | 215770_at |
Sequence information
Nucleotide sequence |
CTTGCCTTCTGGATATTAGGAACAATATCCCAGAAGGCGTGTACAACCCCCTGCGATACT GGGAGACAGCCCGTCCTCACTGGGCTCTCCCTGTCCATGTACCTGGTCACGATGCTGAGG AACCTGTTCATCATCCTGGCTGGCAGCTCTGACCCCCACTTCCACACCCCCATGTACTTC TTCCTCTCCAACCTGTCCTGGGCTGACATTGGTTTCACCTCGGCCACAGTTCCCAAGATG ATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTTATGCGGGCTGCCTGACACAGATG TCTTTCTTTGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTCTGATGGCCTATGAC CGATTTGTGGCCATCTGCCCATCTGTCACCCCCTGCACTACCGAGTCATCATGAATCCTC ACCTCTGTGTCTTCTTAGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGC ACAGCTGGATTGTGTTACACAACTCACCTTCTTCAAGAATGTGGAAATCTATAATTTTTT TTCTGTGACCCATCTCAACTTCTCAACCTTGCCTGTTCTGACAGCATCATCAATAACATA TTATGTATTTTAGATATCCCTATATTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCT TACTATAAAATTGTCTCCTCCATTCCAAGAATTCCATCGTCAGATGGGAAGTATAAAGCC TTCTCCACCTGTGGCTCTCACCTGGCAGTTGTTTGCTTATTTTATGAAACAGGCATTGGC GTGTACCTGACTTCAGCTGTGTCATCATCTCCCAGGAATGGAGTGGTGGCATCAGTGATG TACGCTGTGGTCATCCCCATGCTGAACCCTTTCATCTACAGCCTGAGAAACAGGGACATT CATAGTGCCCTGTGGAGGCTGCGCAGCAGAACAGTCAAATCTCATGATCTGTTCCATCCT TTCTCTTGTGTGAGTAAG |
Conceptual translation |
LAFWILGTISQKACTTPCDTGRQPVLTGLSLSMYLVTMLRNLFIILAGSSDPHFHTPMYF FLSNLSWADIGFTSATVPKMIVDMQSHSRVISYAGCLTQMSFFVLFACIEDMLLTLMAYD RFVAIC/ICHPLHYRVIMNPHLCVFLVLVSFFLSLLDSQLHSWIVL/QLTFFKNVEIY NFF/CDPSQLLNLACSDSIINNILCILDIPIFGFLPISGILLSYYKIVSSIPRIPSSDG KYKAFSTCGSHLAVVCLFYETGIGVYLTSAVSSSPRNGVVASVMYAVVIPMLNPFIYSLR NRDIHSALWRLRSRTVKSHDLFHPFSCVSK Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 100 | -100 | SNP | C/T | 1000GP (YRI) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
CopyNumber | 10 (Hasin) | |||
11 | 86,566,076 | 86,569,153 | CopyNumber | #82 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.