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(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E2P Olfactory Receptor

Gene Symbol OR7E2P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases hg94, OR11-6, HsOR11.17.2P, ORL3640
External Ids HGNC: 8402   GeneBank: AF065857, AF399424, NG_002166   ORDB: ORL3640   
Build #39 labels OR7E2P
Chromosomal location 11:86,857,034-86,858,011 (-)
Cluster 11@87
Synteny CLIC#0
Remarks Disrupted by STR1 repeat

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7E100P 85.44% 309
OR7E102P 83.12% 314
OR7E111P 83.17% 309

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E153 73% 294
Mouse Or7e178 69% 295
Rat Or7e176 64% 300
Cow OR7E185P 70% 293
Orang OR7E100P 85% 297
Orang OR7E111P 82% 297
Orang OR7E102 82% 295
Horse OR7E220 71% 295
Chimp OR7E100P 85% 289
Chimp OR7E111P 82% 297

Expression evidences

Source Accession
ESTs AW514861
GNF Atlas2 215770_at

Sequence information

Nucleotide sequence CTTGCCTTCTGGATATTAGGAACAATATCCCAGAAGGCGTGTACAACCCCCTGCGATACT
GGGAGACAGCCCGTCCTCACTGGGCTCTCCCTGTCCATGTACCTGGTCACGATGCTGAGG
AACCTGTTCATCATCCTGGCTGGCAGCTCTGACCCCCACTTCCACACCCCCATGTACTTC
TTCCTCTCCAACCTGTCCTGGGCTGACATTGGTTTCACCTCGGCCACAGTTCCCAAGATG
ATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTTATGCGGGCTGCCTGACACAGATG
TCTTTCTTTGTCCTTTTTGCATGTATAGAAGACATGCTCCTGACTCTGATGGCCTATGAC
CGATTTGTGGCCATCTGCCCATCTGTCACCCCCTGCACTACCGAGTCATCATGAATCCTC
ACCTCTGTGTCTTCTTAGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCTGC
ACAGCTGGATTGTGTTACACAACTCACCTTCTTCAAGAATGTGGAAATCTATAATTTTTT
TTCTGTGACCCATCTCAACTTCTCAACCTTGCCTGTTCTGACAGCATCATCAATAACATA
TTATGTATTTTAGATATCCCTATATTTGGTTTTCTTCCCATTTCAGGGATCCTTTTGTCT
TACTATAAAATTGTCTCCTCCATTCCAAGAATTCCATCGTCAGATGGGAAGTATAAAGCC
TTCTCCACCTGTGGCTCTCACCTGGCAGTTGTTTGCTTATTTTATGAAACAGGCATTGGC
GTGTACCTGACTTCAGCTGTGTCATCATCTCCCAGGAATGGAGTGGTGGCATCAGTGATG
TACGCTGTGGTCATCCCCATGCTGAACCCTTTCATCTACAGCCTGAGAAACAGGGACATT
CATAGTGCCCTGTGGAGGCTGCGCAGCAGAACAGTCAAATCTCATGATCTGTTCCATCCT
TTCTCTTGTGTGAGTAAG
Conceptual translation LAFWILGTISQKACTTPCDTGRQPVLTGLSLSMYLVTMLRNLFIILAGSSDPHFHTPMYF
FLSNLSWADIGFTSATVPKMIVDMQSHSRVISYAGCLTQMSFFVLFACIEDMLLTLMAYD
RFVAIC/ICHPLHYRVIMNPHLCVFLVLVSFFLSLLDSQLHSWIVL/QLTFFKNVEIY
NFF/CDPSQLLNLACSDSIINNILCILDIPIFGFLPISGILLSYYKIVSSIPRIPSSDG
KYKAFSTCGSHLAVVCLFYETGIGVYLTSAVSSSPRNGVVASVMYAVVIPMLNPFIYSLR
NRDIHSALWRLRSRTVKSHDLFHPFSCVSK

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 100 -100 SNP C/T 1000GP (YRI)

Variations - CNVs

Chr Start End Type Sources
CopyNumber 10 (Hasin)
11 86,566,076 86,569,153 CopyNumber #82 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.