OR7E35P Olfactory Receptor
| Gene Symbol | OR7E35P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OST018, HsOR4.2.5P, ORL3128 |
| External Ids | HGNC: 8408 GeneBank: AF399388, NG_004371 ORDB: ORL3128 |
| Build #39 labels | OR7E35P, OR7E120 |
| Chromosomal location | 4:9,754,892-9,755,805 (+) |
| Cluster | 4@10 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E109P | 88.56% | 306 |
| OR7E36P | 89.25% | 307 |
| OR7E37P | 88.89% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 69% | 298 |
| Mouse | Or7e178 | 64% | 304 |
| Rat | Or7e173 | 63% | 299 |
| Cow | OR7E186 | 67% | 304 |
| Orang | OR7E15P | 86% | 305 |
| Orang | OR7E31DP | 87% | 297 |
| Orang | OR7E14P | 84% | 305 |
| Horse | OR7E225 | 68% | 298 |
| Chimp | OR7E36P | 89% | 307 |
| Chimp | OR7E33P | 86% | 305 |
| Chimp | OR7E38P | 86% | 305 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG202850 |
| mRNA | AF073924 |
| GNF Atlas2 | gnf1h10281_at |
Sequence information
| Nucleotide sequence |
ATGGATGTCTCTATATTCCTCCTCCTAGAACCACAGAGGATCCAGAACGGCAGCCGGTCC TCACTGGGCTGTTCCTGTCCATGTGCCTGGTCACAGTGCTGGGGAAGCTGCTCATCATGT TGGCCTTCAGCCCTGACTCCCACCTCCACACCCACATGTACTTCTTCCTCTCCAACCTGT CCTTGCCTGACATCAGTTTCACCTCCACCATTGTCCCCAAGATGATTGTGGACATCCAGT CTCACAGCAGAGTGATCTCCTATGCAGGCCGCCTGACTCAGATGTCTCTCTTTGCCATTT TTGGAGGCATGGAAGACAGAAATGCTCCTGAGTGTGATGGCCTATGACCGGTTTGTAGCC ATCTGTCACCCTCTATATCATTCAGCCATCATGAATCCATGTTTCTGTGGCTTCCTACTT TTGTTGTCTTTTTTTTTTTTTCTCAGTCTTTTAGACACCCAGCTGCACAACTTGATTGCT TTACAAATGACCTGCTTCAAGGATGTGGAAATTCCTAATTTCTTCTGTGACCCTTCTCAA CTCCCCCATCTTGCATGTTGTGACACCTTCACCAATAACATCATCGTGTATTTCCCTGCT GTCATATTTGTTTTCCTTCCCATCTCGGGGACCCTTTTCTCTTTAAAACTGTTTCCTCCA TTCTGAGGGTTTCATCATCAGGCGGGAAGTATAAAACCTTCTCCACCTGTGGGTCTCACC TGTCAGTTATTTGCTGATTTTATGGAACAGGTGTTGGAGGGTACCTCAGTTCAGATGTGT CATCTTCCCTGAGAAAGGCTGCAGTGGCCTCAGTGATGTACAAGATGGTCACCCCCATGC TGAACCCCTTCATCTACAGCCTGAGAAACAGGGATATGAAAAGTGTCCTGCGGCGGCCGC ACGGCAGCACGGTC |
| Conceptual translation |
MDVSIFLLLE/TEDPERQPVLTGLFLSMCLVTVLGKLLIMLAFSPDSHLHTHMYFFLSN LSLPDISFTSTIVPKMIVDIQSHSRVISYAGRLTQMSLFAIFGGME\EMLLSVMAYDRF VAICHPLYHSAIMNPCFCGFLLLLSFFFFLSLLDTQLHNLIALQMTCFKDVEIPNFFCDP SQLPHLACCDTFTNNIIVYFPAVIFVFLPISGTLF/FKTVSSILRVSSSGGKYKTFSTC GSHLSVICXYGTGVGGYLSSDVSSSLRKAAVASVMYKMVTPMLNPFIYSLRNRDMKSVL RRPHGSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 4 | 9,756,956 | 9,756,956 | Del(1) | -/T | rs58792109 (DbSNP) | |
| 4 | 9,756,944 | 9,756,944 | Del(1) | -/T | rs34497276 (DbSNP) | |
| 4 | 9,756,955 | 9,756,956 | Del(2) | -/TT | rs56160126 (DbSNP) | |
| 4 | 9,756,616 | 9,756,615 | Ins(1) | -/G | rs35822052 (DbSNP) | |
| 4 | 9,756,836 | 9,756,836 | SNP | A/C | rs6834512 (DbSNP) | |
| 4 | 9,757,414 | 9,757,414 | SNP | A/G | rs73090757 (DbSNP) | |
| 4 | 9,756,914 | 9,756,914 | SNP | A/G | rs6834697 (DbSNP) | |
| 4 | 9,756,710 | 9,756,710 | SNP | A/G | rs6834270 (DbSNP) | |
| 4 | 100 | -100 | SNP | C/T | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 4 | 8,707,676 | 9,852,717 | InversionBreakpoint | Variation_0347 (DGV) |
| 4 | 8,705,921 | 9,811,805 | CopyNumber | Variation_2497 (DGV) |
| 4 | 8,522,173 | 10,273,779 | CopyNumber | Variation_3479 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E35P.aApr07-unspliced | main_exon | CDS_partial | chr4 | 9,754,918 | 9,755,754 | + |