Information for CLIC#11

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Human	Mouse	Rat	Dog	Opossum
chr5@180.1 chr5@180.6	chr11@49.1	chr10@34.3 chr10@34.9	-	s16810@0.6

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

human:
OR members in cluster chr5@180.1

Symbol	Chromosome	Start	End	Strand
OR2Y1	5	180739126	180740058	-
OR2AI1P	5	180692835	180693763	-

OR members in cluster chr5@180.6

Symbol	Chromosome	Start	End	Strand
OR4F3	5	181367287	181368222	+
OR2V2	5	181154943	181155887	+
OR2V1	5	181124360	181125304	-

mouse:
OR members in cluster chr11@49.1

Symbol	Chromosome	Start	End	Strand
Or2v1	chr11	49,134,194	49,135,138	+
Or2t26	chr11	49,148,259	49,149,209	+
Or2y1g	chr11	49,280,150	49,281,082	+
Or2v2	chr11	49,112,780	49,113,775	-
Or2y1d	chr11	49,430,478	49,431,410	+
Or2o1	chr11	49,159,980	49,160,951	+
Or8k28	chr2	86,455,331	86,456,269	-

rat:
OR members in cluster chr10@34.3

Symbol	Chromosome	Start	End	Strand
Or2v1	chr10	34,383,396	34,384,340	+
Or2v2b	chr10	34,360,268	34,361,293	-
Or2v2c	chr10	34,300,253	34,301,293	-

OR members in cluster chr10@34.9

Symbol	Chromosome	Start	End	Strand
Or2y1i	chr10	34,692,870	34,693,796	+
Or2y14	chr10	34,726,937	34,727,866	+
Or2y16	chr10	34,645,375	34,646,307	+
Or2y1e	chr10	34,578,356	34,579,288	+
Or2y1	chr10	34,712,870	34,713,802	+
Or2y15	chr10	34,662,186	34,663,118	+
Or2y11	chr10	34,804,878	34,805,810	+
Or2y12	chr10	34,756,094	34,757,026	+
Or2y1g	chr10	34,553,284	34,554,216	+
Or2y1d	chr10	34,631,398	34,632,324	+
Or2y13	chr10	34,744,059	34,744,991	+
Or2y1h	chr10	34,564,009	34,564,941	+
Or2y1c	chr10	34,672,726	34,673,652	+
Or2y17	chr10	34,592,674	34,593,534	+

opossum:
OR members in cluster s16810@0.6

Symbol	Chromosome	Start	End	Strand
Modo-OR2BE1	scaffold_16810	625405	626362	+
Modo-OR2V5	scaffold_16810	594859	595804	-
Modo-OR2BE2	scaffold_16810	440406	441444	+
Modo-OR1F15	scaffold_16810	846216	847158	+
Modo-OR2V4	scaffold_16810	569724	570669	-