HORDE: Information for CLIC#14

Information for CLIC#14


CLIC is CLuster In Conservation, a set of multi-species conserved gene arrays.

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Ancient Genomic Architecture for Mammalian Olfactory Receptor Clusters

Ronny Aloni, Tsviya Olender and Doron Lancet

Genome Biology, 2006 Oct 1;7(10):R88

CLIC#14 composed of the following clusters*:

Human Mouse Rat Dog Opossum
chr7@141 chr6@40.7 chr4@68.4 chr16@13 -
* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

human:
OR members in cluster chr7@141

SymbolChromosomeStartEndStrand
OR9A4 7 141918876 141919817 +
OR9A1P 7 141887148 141888089 +
OR9A3P 7 141862860 141863819 +
OR9N1P 7 141911404 141912024 +

mouse:
OR members in cluster chr6@40.7

SymbolChromosomeStartEndStrand
Or9a4 chr6 40,571,388 40,572,329 +

rat:
OR members in cluster chr4@68.4

SymbolChromosomeStartEndStrand
Or9a4 chr4 68,804,661 68,805,602 +
Or9a7-ps chr4 68,375,763 68,376,701 -

dog:
OR members in cluster chr16@13

SymbolChromosomeStartEndStrand
OR9A4 chrUn_AAEX03022866 373 1314 -
OR9A7 chr16 7293649 7294590 -


List of all CLICs
Horde homepage