Information for CLIC#19

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Human	Mouse	Rat	Dog	Opossum
chr9@104.5	chr4@52.8	chr5@70.2	chr11@61.9	s18607@0.4

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

human:
OR members in cluster chr9@104.5

Symbol	Chromosome	Start	End	Strand
OR13C8	9	104569168	104570127	+
OR13C2	9	104604674	104605627	-
OR13C3	9	104535773	104536723	-
OR13D2P	9	104590017	104590950	+
OR13C4	9	104526256	104527209	-
OR13C9	9	104617251	104618204	-
OR13D3P	9	104722335	104723268	+
OR13C1P	9	104656757	104657716	-
OR13F1	9	104504263	104505219	+
OR13D1	9	104694518	104695459	+
OR13I1P	9	104629754	104631018	+
OR13C5	9	104598460	104599413	-

mouse:
OR members in cluster chr4@52.8

Symbol	Chromosome	Start	End	Strand
Or13c3	chr4	52,855,561	52,856,511	-
Or13f5	chr4	52,825,399	52,826,355	+
Or13d1	chr4	52,970,623	52,971,564	+
Or13c25	chr4	52,910,836	52,911,792	-
Or13c9	chr4	52,935,433	52,936,284	-

rat:
OR members in cluster chr5@70.2

Symbol	Chromosome	Start	End	Strand
Or13c25	chr5	69,577,502	69,578,458	-
Or13c3f	chr5	68,619,193	68,620,152	+
Or13c9	chr5	69,751,367	69,752,314	-
Or13f5	chr5	64,621,407	64,622,359	-
Or13c3c	chr5	69,276,833	69,277,792	-
Or13d1	chr5	69,784,806	69,785,741	+
Or8i8-ps	chr5	69,156,429	69,157,244	-
Or13c3h	chr5	69,516,330	69,517,286	-
Or13c3g	chr5	69,477,296	69,478,255	-

dog:
OR members in cluster chr11@61.9

Symbol	Chromosome	Start	End	Strand
OR13F1B	chr11	60565462	60566400	-
OR13C8	chr11	60531372	60532328	+
OR13C2	chr11	60587679	60588632	-
OR13C3	chr11	60508850	60509800	-
OR13D3	chr11	60691604	60692545	+
OR13C4	chr11	60492683	60493636	-
OR13D1B	chr11	60678099	60679049	+
OR13F1	chr11	60467150	60468130	+
OR13C2B	chr11	60575223	60576194	-
OR13D1	chr11	60643804	60644739	+
OR13C1	chr11	60626791	60627750	-
OR13D2	chr11	60558285	60559220	+

opossum:
OR members in cluster s18607@0.4

Symbol	Chromosome	Start	End	Strand
Modo-OR13D27	scaffold_18607	540835	541084	+
Modo-OR13D21P	scaffold_18607	500413	501341	+
Modo-OR13C2	scaffold_18607	674131	675154	+
Modo-OR13D13	scaffold_18607	385701	386640	+
Modo-OR13D4P	scaffold_18607	367557	368497	+
Modo-OR13D11	scaffold_18607	328277	329219	+
Modo-OR13D20	scaffold_18607	522030	522969	+
Modo-OR13D15P	scaffold_18607	252531	253470	-
Modo-OR13D26	scaffold_18607	404283	405222	+
Modo-OR13D23P	scaffold_18607	610031	611000	+
Modo-OR13D22P	scaffold_18607	581593	582535	+
Modo-OR13C26	scaffold_18607	272920	273871	-
Modo-OR13D9	scaffold_18607	157215	158151	-
Modo-OR13AJ1P	scaffold_18607	667387	668223	+
Modo-OR13D10P	scaffold_18607	289917	290858	+
Modo-OR13D12P	scaffold_18607	351334	352275	+
Modo-OR13D14	scaffold_18607	651737	652685	+
Modo-OR13D17	scaffold_18607	486160	487099	+
Modo-OR2K3P	scaffold_18607	43341	44240	+
Modo-OR13D8	scaffold_18607	446868	447807	+
Modo-OR13D28	scaffold_18607	558547	559486	+
Modo-OR13D1	scaffold_18607	471674	472613	+