HORDE: Information for CLIC#20

Information for CLIC#20


CLIC is CLuster In Conservation, a set of multi-species conserved gene arrays.

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Ancient Genomic Architecture for Mammalian Olfactory Receptor Clusters

Ronny Aloni, Tsviya Olender and Doron Lancet

Genome Biology, 2006 Oct 1;7(10):R88

CLIC#20 composed of the following clusters*:

Human Mouse Rat Dog Opossum
chr9@111.2 chr4@58.7 chr5@76.8 chr11@67.4 -
* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

human:
OR members in cluster chr9@111.2

SymbolChromosomeStartEndStrand
OR2K2 9 111327486 111328433 -

mouse:
OR members in cluster chr4@58.7

SymbolChromosomeStartEndStrand
Or5m9b chr2 86,074,742 86,075,671 +

rat:
OR members in cluster chr5@76.8

SymbolChromosomeStartEndStrand
Or2k2 chr5 75,909,454 75,910,392 -

dog:
OR members in cluster chr11@67.4

SymbolChromosomeStartEndStrand
OR2K2 chr11 66032140 66033087 -


List of all CLICs
Horde homepage