Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.
Additional details can be found at:
Genome Biology, 2006 Oct 1;7(10):R88
Human | Mouse | Rat | Dog | Opossum |
---|---|---|---|---|
chr11@7.8 | chr7@102.3 | chr1@166 | chr21@33.7 | - |
human:
OR members in cluster chr11@7.8
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
OR10A3 | 11 | 7938579 | 7939520 | - | OR5P4P | 11 | 7745990 | 7746909 | + | OR10A6 | 11 | 7927721 | 7928662 | - | OR10AB1P | 11 | 7728400 | 7729337 | + | OR5P2 | 11 | 7795977 | 7796942 | - | OR5P1P | 11 | 7772893 | 7773814 | - | OR5P3 | 11 | 7825040 | 7825972 | - | OR5E1P | 11 | 7848700 | 7849632 | + |
mouse:
OR members in cluster chr7@102.3
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
Or5p53 | chr7 | 107,933,522 | 107,934,451 | + | Or10a47 | chr7 | 108,713,355 | 108,714,332 | + | Or5p69 | chr7 | 108,367,492 | 108,368,433 | + | Or5e1 | chr7 | 108,754,858 | 108,755,784 | + | Or5p72 | chr7 | 108,422,573 | 108,423,514 | + | Or5p79 | chr7 | 108,621,814 | 108,622,761 | + | Or10a49 | chr7 | 108,868,211 | 108,869,230 | - | Or5p78 | chr7 | 108,612,309 | 108,613,250 | + | Or10a50 | chr7 | 108,893,464 | 108,894,405 | - | Or10a3 | chr7 | 108,880,606 | 108,881,604 | - | Or10a48 | chr7 | 108,825,068 | 108,825,997 | - | Or5p80 | chr7 | 108,629,994 | 108,630,923 | + | Or5p52 | chr7 | 107,902,719 | 107,903,648 | + | Or5p76 | chr7 | 108,523,007 | 108,523,948 | - | Or5p82 | chr7 | 107,861,085 | 107,861,999 | - | Or10a3b | chr7 | 108,845,067 | 108,846,008 | - | Or7r1 | chrX | 74,570,654 | 74,571,574 | - |
rat:
OR members in cluster chr1@166
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
Or5p81 | chr1 | 172,892,134 | 172,893,075 | + | Or5p60 | chr1 | 172,464,478 | 172,465,446 | - | Or8i6-ps | chr1 | 172,053,166 | 172,053,804 | + | Or5p6 | chr1 | 172,214,789 | 172,215,730 | - | Or5p69 | chr1 | 172,792,874 | 172,793,815 | + | Or5p60c | chr1 | 172,394,910 | 172,395,872 | - | Or5p78b-ps | chrUn_AABR07024042v1 | 32,080 | 33,207 | + | Or5p66 | chr1 | 172,566,908 | 172,567,846 | - | Or5p79 | chr1 | 172,813,394 | 172,814,335 | + | Or5p73 | chr1 | 172,664,300 | 172,665,244 | - | Or5p59 | chr1 | 172,348,583 | 172,349,527 | + | Or5p76b | chr1 | 172,942,912 | 172,943,853 | - | Or5p5 | chr1 | 172,075,203 | 172,076,186 | - | Or10a3c | chr1 | 173,128,097 | 173,129,074 | - | Or5p69b | chr1 | 172,728,264 | 172,729,139 | + | Or5p60b | chr1 | 172,485,303 | 172,486,268 | - | Or5p68 | chr1 | 172,615,680 | 172,616,633 | - | Or5p4 | chr1 | 172,264,473 | 172,265,408 | + | Or10ab4 | chr1 | 172,242,504 | 172,243,484 | + | Or10a48b-ps | chr1 | 173,423,880 | 173,424,527 | - | Or5p53 | chr1 | 172,129,514 | 172,130,443 | + | Or5p84-ps | chr1 | 172,289,594 | 172,290,791 | + | Or5p56 | chr1 | 172,157,739 | 172,158,668 | + | Or5p61-ps | chr1 | 172,511,099 | 172,512,242 | - | Or5p72 | chr1 | 172,625,352 | 172,626,293 | + | Or5p56b-ps | chr1 | 172,186,344 | 172,187,476 | + | Or5p83-ps | chr1 | 172,714,351 | 172,715,077 | + | Or5p75-ps | chr1 | 172,769,796 | 172,770,940 | + | Or10a49 | chr1 | 173,442,165 | 173,443,226 | - | Or5p50 | chr1 | 172,058,211 | 172,059,221 | - | Or5p5b | chr1 | 172,051,215 | 172,052,150 | + | Or5p78c | chr1 | 172,752,416 | 172,753,357 | + | Or5p1 | chr1 | 172,599,610 | 172,600,542 | + | Or5p78 | chr1 | 172,807,296 | 172,808,330 | + | Or10a48 | chr1 | 173,392,458 | 173,393,390 | - | Or10a3 | chr1 | 173,455,511 | 173,456,530 | - | Or8af1-ps | chr1 | 172,605,498 | 172,606,446 | - | Or5p80 | chr1 | 172,822,444 | 172,823,576 | + | Or5p6b | chr1 | 172,283,255 | 172,284,196 | + | Or5p76 | chr1 | 173,123,997 | 173,124,942 | - | Or5p60d | chr1 | 172,551,158 | 172,552,099 | - | Or5p66b | chr1 | 172,368,574 | 172,369,515 | - |
dog:
OR members in cluster chr21@33.7
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
OR5P4 | chr21 | 31368594 | 31369529 | + | OR10A3 | chr21 | 31492262 | 31493203 | - | OR5E1 | chr21 | 31426028 | 31426975 | + | OR10A6 | chr21 | 31460895 | 31461974 | - | OR10AB3 | chr21 | 31395182 | 31396144 | + | OR5P6 | chr21 | 31404663 | 31405604 | - | OR10AB2 | chr21 | 31378585 | 31379550 | - | OR10A3E | chr21 | 31472703 | 31473644 | - | OR5P5 | chr21 | 31359709 | 31360644 | + |