HORDE: Information for CLIC#33

Information for CLIC#33

CLIC is CLuster In Conservation, a set of multi-species conserved gene arrays.

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Ancient Genomic Architecture for Mammalian Olfactory Receptor Clusters

Ronny Aloni, Tsviya Olender and Doron Lancet

Genome Biology, 2006 Oct 1;7(10):R88

CLIC#33 composed of the following clusters^*:

Human Mouse Rat Dog Opossum

chr14@20.2 - chr15@27.1 chr15@20.9 -

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

Human	Mouse	Rat	Dog	Opossum
chr14@20.2	-	chr15@27.1	chr15@20.9	-

human:
OR members in cluster chr14@20.2

Symbol Chromosome Start End Strand
OR6S1 14 20640699 20641691 -

Symbol	Chromosome	Start	End	Strand
OR6S1	14	20640699	20641691	-

rat:
OR members in cluster chr15@27.1

Symbol Chromosome Start End Strand
Or6s1 chr15 27,996,818 27,997,810 -

Symbol	Chromosome	Start	End	Strand
Or6s1	chr15	27,996,818	27,997,810	-

dog:
OR members in cluster chr15@20.9

Symbol Chromosome Start End Strand
OR6S1 chr15 17934184 17935176 -

Symbol	Chromosome	Start	End	Strand
OR6S1	chr15	17934184	17935176	-

List of all CLICs
Horde homepage