HORDE: Information for CLIC#34

Information for CLIC#34

CLIC is CLuster In Conservation, a set of multi-species conserved gene arrays.

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Ancient Genomic Architecture for Mammalian Olfactory Receptor Clusters

Ronny Aloni, Tsviya Olender and Doron Lancet

Genome Biology, 2006 Oct 1;7(10):R88

CLIC#34 composed of the following clusters^*:

Human Mouse Rat Dog Opossum

chr14@20.7 chr14@47.1 chr15@27.5 - -

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

Human	Mouse	Rat	Dog	Opossum
chr14@20.7	chr14@47.1	chr15@27.5	-	-

human:
OR members in cluster chr14@20.7

Symbol Chromosome Start End Strand
OR5AU1 14 21154940 21155872 -

Symbol	Chromosome	Start	End	Strand
OR5AU1	14	21154940	21155872	-

mouse:
OR members in cluster chr14@47.1

Symbol Chromosome Start End Strand
Or5au1 chr14 52,035,177 52,036,109 -

Symbol	Chromosome	Start	End	Strand
Or5au1	chr14	52,035,177	52,036,109	-

rat:
OR members in cluster chr15@27.5

Symbol Chromosome Start End Strand
Or5au1 chr15 28,445,853 28,446,785 -

Symbol	Chromosome	Start	End	Strand
Or5au1	chr15	28,445,853	28,446,785	-

List of all CLICs
Horde homepage