Information for CLIC#35

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Human	Mouse	Rat	Dog	Opossum
chr14@21.2	chr14@47.5	chr15@27.9	chr15@21.6	s19262@4.7

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

human:
OR members in cluster chr14@21.2

Symbol	Chromosome	Start	End	Strand
OR4E1P	14	21669991	21670935	-
OR10G2	14	21633913	21634842	-
OR10G1P	14	21601885	21602825	-
OR10G3	14	21569806	21570744	-
OR4E2	14	21665083	21666021	+

mouse:
OR members in cluster chr14@47.5

Symbol	Chromosome	Start	End	Strand
Or4e2	chr14	52,450,415	52,451,338	+
Or10g3	chr14	52,372,113	52,373,051	-
Or10g1	chr14	52,409,917	52,410,870	-
Or10g1b	chr14	52,389,818	52,390,906	-
Or4e1	chr14	52,463,078	52,464,007	-

rat:
OR members in cluster chr15@27.9

Symbol	Chromosome	Start	End	Strand
Or4e2	chr15	28,894,627	28,895,550	+
Or10g3	chr15	28,805,814	28,806,755	-
Or4e5	chr15	28,934,268	28,935,269	-
Or10g1	chr15	28,852,629	28,853,582	-
Or10g1b	chr15	28,834,843	28,835,796	-
Or4e1	chr15	28,909,345	28,910,274	-
Or10g3c	chr15	28,785,156	28,786,094	-

dog:
OR members in cluster chr15@21.6

Symbol	Chromosome	Start	End	Strand
OR4E1	chr15	18645942	18646886	-
OR4E2	chr15	18641193	18642116	+

opossum:
OR members in cluster s19262@4.7

Symbol	Chromosome	Start	End	Strand
Modo-OR10G18P	scaffold_19262	4729539	4730474	+
Modo-OR10G1	scaffold_19262	4659086	4660040	+
Modo-OR4E2P	scaffold_19262	4612914	4613842	-
Modo-OR10G19P	scaffold_19262	4781520	4782390	+
Modo-OR10G17	scaffold_19262	4706686	4707625	+
Modo-OR10G3	scaffold_19262	4766413	4767352	+
Modo-OR10G16	scaffold_19262	4682766	4683684	+
Modo-OR4E1	scaffold_19262	4594423	4595365	+