HORDE: Information for CLIC#43

Information for CLIC#43

CLIC is CLuster In Conservation, a set of multi-species conserved gene arrays.

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Ancient Genomic Architecture for Mammalian Olfactory Receptor Clusters

Ronny Aloni, Tsviya Olender and Doron Lancet

Genome Biology, 2006 Oct 1;7(10):R88

CLIC#43 composed of the following clusters^*:

Human Mouse Rat Dog Opossum

- chr8@84.5 chr19@23.2 - -

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

Human	Mouse	Rat	Dog	Opossum
-	chr8@84.5	chr19@23.2	-	-

mouse:
OR members in cluster chr8@84.5

Symbol Chromosome Start End Strand
Or7c19 chr8 85,230,497 85,231,432 +

Symbol	Chromosome	Start	End	Strand
Or7c19	chr8	85,230,497	85,231,432	+

rat:
OR members in cluster chr19@23.2

Symbol Chromosome Start End Strand
Or7c19 chr19 27,534,857 27,535,792 -

Symbol	Chromosome	Start	End	Strand
Or7c19	chr19	27,534,857	27,535,792	-

List of all CLICs
Horde homepage