HORDE: Information for CLIC#44

Information for CLIC#44

CLIC is CLuster In Conservation, a set of multi-species conserved gene arrays.

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Ancient Genomic Architecture for Mammalian Olfactory Receptor Clusters

Ronny Aloni, Tsviya Olender and Doron Lancet

Genome Biology, 2006 Oct 1;7(10):R88

CLIC#44 composed of the following clusters^*:

Human Mouse Rat Dog Opossum

- chr8@82.8 chr19@26.3 - -

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

Human	Mouse	Rat	Dog	Opossum
-	chr8@82.8	chr19@26.3	-	-

mouse:
OR members in cluster chr8@82.8

Symbol Chromosome Start End Strand
Or7r1 chrX 74,570,654 74,571,574 -

Symbol	Chromosome	Start	End	Strand
Or7r1	chrX	74,570,654	74,571,574	-

rat:
OR members in cluster chr19@26.3

Symbol Chromosome Start End Strand
Or10k2 chr19 24,670,699 24,671,640 +

Symbol	Chromosome	Start	End	Strand
Or10k2	chr19	24,670,699	24,671,640	+

List of all CLICs
Horde homepage