Information for CLIC#46

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Human	Mouse	Rat	Dog	Opossum
chr19@15.9	chr8@71.2	chr16@18.2	chr20@49.3	s11661@2.3

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

human:
OR members in cluster chr19@15.9

Symbol	Chromosome	Start	End	Strand
OR10H4	19	15949008	15949955	+
OR10H2	19	15728044	15728988	+
OR10H3	19	15741393	15742340	+
OR10H5	19	15794049	15794993	+
OR1AB1P	19	16051977	16052715	+
OR10H1	19	15807084	15808037	-

mouse:
OR members in cluster chr8@71.2

Symbol	Chromosome	Start	End	Strand
Or2z9	chr8	72,099,762	72,100,703	+
Or1ab2	chr8	72,109,376	72,110,506	+

rat:
OR members in cluster chr16@18.2

Symbol	Chromosome	Start	End	Strand

dog:
OR members in cluster chr20@49.3

Symbol	Chromosome	Start	End	Strand
OR10H4	chr20	46494276	46495304	-
OR2Z3	chr20	46432097	46432969	-
OR1AB2	chr20	46391448	46392392	-
OR1AE1	chr20	46578650	46579582	-
OR10H1	chr20	46558782	46559723	-
OR10H6	chr20	46543258	46544214	+
OR10H4B	chr20	46532526	46533545	+
OR10H4F	chr20	46477679	46478524	+
OR10H4D	chr20	46486639	46487565	+
OR10H2	chr20	46464193	46465149	+
OR10H4E	chr20	46525196	46526116	+
OR10H4C	chr20	46507601	46508527	-
OR1AB3	chr20	46407860	46408798	-

opossum:
OR members in cluster s11661@2.3

Symbol	Chromosome	Start	End	Strand
Modo-OR1AB5	scaffold_11661	2279006	2279945	-
Modo-OR10H23	scaffold_11661	2628961	2629903	-
Modo-OR1AB11	scaffold_11661	2331712	2332651	-
Modo-OR1AB2	scaffold_11661	2014721	2015660	-
Modo-OR1AB14	scaffold_11661	2261238	2262177	-
Modo-OR1F16P	scaffold_11661	2558287	2558706	+
Modo-OR1AB4	scaffold_11661	2091576	2092521	-
Modo-OR1AE1P	scaffold_11661	2575214	2576140	+
Modo-OR1AB10P	scaffold_11661	2190618	2191558	-
Modo-OR1AB8	scaffold_11661	2294308	2295247	-
Modo-OR1AE2	scaffold_11661	2551996	2552929	+
Modo-OR10H22P	scaffold_11661	2413783	2414694	-
Modo-OR10H24	scaffold_11661	2515020	2515962	+
Modo-OR1AB9	scaffold_11661	2238062	2239049	-
Modo-OR1AB6	scaffold_11661	2051166	2052156	-
Modo-OR10H21	scaffold_11661	2612845	2613787	+