Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.
Additional details can be found at:
Genome Biology, 2006 Oct 1;7(10):R88
Human | Mouse | Rat | Dog | Opossum |
---|---|---|---|---|
chrX@130.3 | chrX@44.5 chrX@44.9 | chrX@136.4 chrX@137.1 | chrX@105.6 | s11989@0.2 |
human:
OR members in cluster chrX@130.3
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
OR7L1P | X | 131596121 | 131597203 | + | OR11N1P | X | 131324334 | 131325313 | - | OR2AF1P | X | 131619046 | 131619935 | + | OR5AW1P | X | 131341529 | 131342452 | - | OR11Q1P | X | 131204095 | 131205043 | + | OR13K1P | X | 131562729 | 131563812 | + | OR5BH1P | X | 131398049 | 131398957 | - | OR1AA1P | X | 131424301 | 131425268 | + | OR13H1 | X | 131544074 | 131544997 | + |
mouse:
OR members in cluster chrX@44.5
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
Or5bh3 | chrX | 50,009,309 | 50,010,235 | - |
OR members in cluster chrX@44.9
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
Or1aa2 | chrX | 50,425,499 | 50,426,509 | - |
rat:
OR members in cluster chrX@136.4
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
Or11n2 | chrX | 136,892,141 | 136,893,094 | - | Or5o1 | chrX | 136,736,795 | 136,737,874 | - | Or5bh3 | chrX | 137,014,346 | 137,015,266 | - | Or11q2 | chrX | 136,715,498 | 136,716,657 | + |
OR members in cluster chrX@137.1
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
Or1aa2 | chrUn_KL568460v1 | 62,647 | 63,582 | - |
dog:
OR members in cluster chrX@105.6
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
OR13H2P | chrX | 102640012 | 102640936 | + | OR5BH3 | chrX | 102531219 | 102532139 | - | OR1AG1P | chrX | 102562881 | 102563813 | + |
opossum:
OR members in cluster s11989@0.2
Symbol | Chromosome | Start | End | Strand |
---|---|---|---|---|
Modo-OR6AJ1P | scaffold_11989 | 72680 | 73450 | - | Modo-OR13H2 | scaffold_11989 | 249405 | 250329 | + | Modo-OR13K3 | scaffold_11989 | 305895 | 306834 | + | Modo-OR13K2 | scaffold_11989 | 262381 | 263317 | + | Modo-OR2AF2 | scaffold_11989 | 344206 | 345145 | + | Modo-OR5CA1 | scaffold_11989 | 192665 | 193604 | - | Modo-ORUN1 | scaffold_11989 | 14578 | 15063 | + | Modo-OR5Z1P | scaffold_11989 | 110907 | 111834 | - | Modo-OR8Z1P | scaffold_11989 | 165439 | 166211 | - |