Information for CLIC#48

Using a novel algorithm, we identified 48 multi-species CLICs containing more than 90% of the mammalian olfactory receptor genes.

Additional details can be found at:

Human	Mouse	Rat	Dog	Opossum
chrX@130.3	chrX@44.5 chrX@44.9	chrX@136.4 chrX@137.1	chrX@105.6	s11989@0.2

^* Clusters were selected with a maximal intergenic distance of 300kb,different than the 100kb used in HORDE

human:
OR members in cluster chrX@130.3

Symbol	Chromosome	Start	End	Strand
OR7L1P	X	131596121	131597203	+
OR11N1P	X	131324334	131325313	-
OR2AF1P	X	131619046	131619935	+
OR5AW1P	X	131341529	131342452	-
OR11Q1P	X	131204095	131205043	+
OR13K1P	X	131562729	131563812	+
OR5BH1P	X	131398049	131398957	-
OR1AA1P	X	131424301	131425268	+
OR13H1	X	131544074	131544997	+

mouse:
OR members in cluster chrX@44.5

Symbol	Chromosome	Start	End	Strand
Or5bh3	chrX	50,009,309	50,010,235	-

OR members in cluster chrX@44.9

Symbol	Chromosome	Start	End	Strand
Or1aa2	chrX	50,425,499	50,426,509	-

rat:
OR members in cluster chrX@136.4

Symbol	Chromosome	Start	End	Strand
Or11n2	chrX	136,892,141	136,893,094	-
Or5o1	chrX	136,736,795	136,737,874	-
Or5bh3	chrX	137,014,346	137,015,266	-
Or11q2	chrX	136,715,498	136,716,657	+

OR members in cluster chrX@137.1

Symbol	Chromosome	Start	End	Strand
Or1aa2	chrUn_KL568460v1	62,647	63,582	-

dog:
OR members in cluster chrX@105.6

Symbol	Chromosome	Start	End	Strand
OR13H2P	chrX	102640012	102640936	+
OR5BH3	chrX	102531219	102532139	-
OR1AG1P	chrX	102562881	102563813	+

opossum:
OR members in cluster s11989@0.2

Symbol	Chromosome	Start	End	Strand
Modo-OR6AJ1P	scaffold_11989	72680	73450	-
Modo-OR13H2	scaffold_11989	249405	250329	+
Modo-OR13K3	scaffold_11989	305895	306834	+
Modo-OR13K2	scaffold_11989	262381	263317	+
Modo-OR2AF2	scaffold_11989	344206	345145	+
Modo-OR5CA1	scaffold_11989	192665	193604	-
Modo-ORUN1	scaffold_11989	14578	15063	+
Modo-OR5Z1P	scaffold_11989	110907	111834	-
Modo-OR8Z1P	scaffold_11989	165439	166211	-