OR10B1P Olfactory Receptor
| Gene Symbol | OR10B1P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | B |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | AC003956-A, OR19-19, HsOR19.3.13P, ORL3789 |
| External Ids | HGNC: 8163 ORDB: ORL3789 |
| Build #39 labels | OR10B1P |
| Chromosomal location | 19:15,141,108-15,142,008 (-) |
| Cluster | 19@15b |
| Synteny | CLIC#45 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10R3P | 45.95% | 296 |
| OR10T1P | 49.83% | 293 |
| OR10T2 | 49.83% | 293 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10T2 | 51% | 295 |
| Mouse | Or10b1-ps | 79% | 301 |
| Rat | Or10j2 | 48% | 295 |
| Cow | OR10T1 | 51% | 295 |
| Orang | OR10T1 | 49% | 303 |
| Horse | OR10J1C | 50% | 295 |
| Chimp | OR10T2 | 50% | 294 |
Sequence information
| Nucleotide sequence |
ATGATGGGATTCTCCAACCTCCCACACCTGAGGAACACACTCTTCACCCTGTTCTTCCTT ACCTACCTGGTCACCCTCGGTGGCAACGTCACCATCATCACCATCACCCATGCGGATAGG TCCCGCCACACTCCCATGTACCACTTCCTGGTGGTGCTGTCCCTCTCGGAGACCTGCTAT ACACGCTGGTCACCATCCCCAGCATGCTGGCTCATCTGCTGATGGAGACCAGGCCATCTC CATCCCTGGCTGTCAGGCTCAGATGTTTTTCTTCCTGGGTCTGGGATGCAGCCACTGCTT CCTCCTTACCCTGATGGGTTATGACCGCTATGTGGCCATCTGCCACCCCCTGCGCTACTC TATGGTCATGAGACCCACCGTTTGCCTCTGCCTGGGAGCCCTGGTTTTCTGCTCTGGGTT CTCGGTGGCCTTGATCGAGACCAGCATGATCTTCTCATCGCCCTTTTGCGGCGGAGACCA CGTGGAGCACTTCTTCTGTGACATCGCCCCGGTGCTGAAGCTCAGCTGCGCCAAGAGTGC CAGCAAGGCGCTGGGCATCTTTTTCCTGAGCGTCCTGGTGGTGCTGATGTCCTTCGTCCC GATCCTCTTCTCCTATGCCTTCATCGTGGCTGCCATCGTGAGGATTTCCTTGGCAGCCGG CCGGCGCAAGGCCTTCTCCACCTGTGTGGCCCACGTCACCGTGGTCGTAGTACATTTTGA CTGCGCCTCCATCATCTACTTGCGTCCGGAGTCCGGGGCCAACCCCGACCAGGACCGCTT GGTGGCTGTGTTCTACACGGTGGTGATGCCACTGCTGAACCCTGTGGTGTGCACTCTGTG GAACAAGGAGGTGAGAGTGGCTCTGAGGAGGACCCTGGCGTGGAGCCGTGGGGTTTTTAA A |
| Conceptual translation |
MMGFSNLPHLRNTLFTLFFLTYLVTLGGNVTIITITHADRSRHTPMYH/PGGAVPLGDL LYTLVTIPSMLAHLLMETRP/SIPGCQAQMFFFLGLGCSHCFLLTLMGYDRYVAICHPL RYSMVMRPTVCLCLGALVFCSGFSVALIETSMIFSSPFCGGDHVEHFFCDIAPVLKLSCA KSASKALGIFFLSVLVVLMSFVPILFSYAFIVAAIVRISLAAGRRKAFSTCVAHVTVVVV HFDCASIIYLRPESGANPDQDRLVAVFYTVVMPLLNPVVCTLWNKEVRVALRRTLAWSRG VFK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 19 | 15,141,122 | 15,141,122 | SNP | G/A | 1000GP (CHBJPT) | |
| 19 | 15,141,211 | 15,141,211 | SNP | G/A | 1000GP (CEU) | |
| 19 | 15,141,255 | 15,141,255 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 19 | 15,141,266 | 15,141,266 | SNP | G/C | 1000GP (CEU, CHBJPT) | |
| 19 | 15,141,358 | 15,141,358 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 19 | 15,141,371 | 15,141,371 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 19 | 15,141,414 | 15,141,414 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 19 | 15,141,444 | 15,141,444 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 19 | 15,141,679 | 15,141,679 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 19 | 15,251,933 | 15,251,933 | SNP | A/G | rs59908756 (DbSNP) | |
| 19 | 15,252,066 | 15,252,066 | SNP | G/A | rs61740292 (DbSNP) | |
| 19 | 15,252,077 | 15,252,077 | SNP | C/G | rs59953204 (DbSNP) | |
| 19 | 15,252,169 | 15,252,169 | SNP | A/G | rs11879608 (DbSNP) | |
| 19 | 15,252,182 | 15,252,182 | SNP | T/C | rs61745957 (DbSNP) | |
| 19 | 15,252,225 | 15,252,225 | SNP | G/A | rs61745946 (DbSNP) | |
| 19 | 15,252,255 | 15,252,255 | SNP | A/G | rs11882609 (DbSNP) | |
| 19 | 15,252,361 | 15,252,361 | SNP | G/A | rs61750473 (DbSNP) | |
| 19 | 15,252,490 | 15,252,490 | SNP | T/C | rs61746401 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 19 | 15,096,950 | 15,259,179 | CopyNumber | Variation_4068 (DGV) |
| 19 | 15,212,434 | 15,395,623 | CopyNumber | Variation_47932 (DGV) |
| 19 | 15,249,919 | 15,252,919 | Deletion | #248 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.