OR10D3 Olfactory Receptor
| Gene Symbol | OR10D31 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | D |
| Pseudogene | No |
| CORP pseudogene probability score | |
| Aliases | OR11-295, HSHTPCRX09, OR11-293, HsOR11.18.19 |
| External Ids | HGNC: 8168 |
| Build #39 labels | |
| Chromosomal location | 11:124,185,270-124,186,205 (+) |
| Cluster | 11@124 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Expression evidences
| Source | Accession |
|---|---|
| ESTs | EG357672 |
| mRNA | AB529246 |
Sequence information
| Nucleotide sequence |
ATGGAGGTGAAGAACTGCTGCATGGTGACAGAGTTCATCCTTTTGGGAATCCCACACACA GAGGGGCTGGAGATGACACTTTTGTCTTATTCTTGCCCTTCTATGCCTGCACTCTACTGG GAAATGTGTCTATCCTTGTTGCTGTTATGTCTTCTGCTCGCCTTCACACACCTATGTATT TCTTCCTGGGAAACTTGTCTGTGTTTGACATGGGTTTCTCCTCAGTGACTTGTCCCAAAA TGCTGCTCTACCTTATGGGGCTGAGCCGACTCATCTCCTACAAAGACTGTGTCTGCCAGC TTTTCTTCTTCCATTTCCTCGGGAGCATTGAGTGCTTCTTGTTTACGGTGATGGCCTATG ACCGCTTCACTGCCATCTGTTATCCTCTGCGATACACAGTCATCATGAACCCAAGGATCT GTGTGGCCCTGGCTGTGGGCACATGGCTGTTAGGGTGCATTCATTCCAGTATCTTGACCT CCCTCACCTTCACCTTGCCATACTGTGGTCCCAATGAAGTGGATCACTTCTTCTGTGACA TTCCAGCACTGTTGCCCTTGGCCTGTGCTGACACATCCTTAGCCCAGAGGGTGAGCTTCA CCAACGTTGGCCTCATATCTCTTGTCTGCTTTCTGCTAATTCTTTTATCCTACACTAGAA TCACAATATCTATCTTAAGCATTCGTACAACTGAGGGCCGTCGCCGTGCCTTCTCCACCT GCAGTGCTCACCTCATTGCCATCCTCTGTGCCTATGGGCCCATCATCACTGTCTACCTGC AGCCCACACCCAACCCCATGCTGGGAACCGTGGTACAAATTCTCATGAATCTGGTAGGAC CAATGCTGAACCCTTTGATCTATACCTTGAGGAATAAGGAAGTAAAAACAGCCCTGAAAA CAATATTGCACAGGACAGGCCATGTTCCTGAGAGT |
| Conceptual translation |
MEVKNCCMVTEFILLGIPHTEGLEM/LFVLFLPFYACTLLGNVSILVAVMSSARLHTPM YFFLGNLSVFDMGFSSVTCPKMLLYLMGLSRLISYKDCVCQLFFFHFLGSIECFLFTVMA YDRFTAICYPLRYTVIMNPRICVALAVGTWLLGCIHSSILTSLTFTLPYCGPNEVDHFFC DIPALLPLACADTSLAQRVSFTNVGLISLVCFLLILLSYTRITISILSIRTTEGRRRAFS TCSAHLIAILCAYGPIITVYLQPTPNPMLGTVVQILMNLVGPMLNPLIYTLRNKEVKTAL KTILHRTGHVPES Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 124,056,088 | 124,056,088 | SNP | A/G | rs61907117 (DbSNP) | |
| 11 | 124,056,257 | 124,056,257 | SNP | A/G | rs61746122 (DbSNP) | |
| 11 | 124,056,377 | 124,056,377 | SNP | T/C | rs2512228 (DbSNP) | |
| 11 | 124,056,450 | 124,056,450 | SNP | C/G | rs61743734 (DbSNP) | |
| 11 | 124,056,453 | 124,056,453 | SNP | C/G | rs7937661 (DbSNP) | |
| 11 | 124,056,566 | 124,056,566 | SNP | A/G | rs7937809 (DbSNP) | |
| 11 | 124,056,581 | 124,056,581 | SNP | G/A | rs2466584 (DbSNP) | |
| 11 | 124,056,582 | 124,056,582 | SNP | C/T | rs7937603 (DbSNP) | |
| 11 | 124,056,732 | 124,056,732 | SNP | T/G | rs2512227 (DbSNP) | |
| 11 | 124,056,787 | 124,056,787 | SNP | G/A | rs2512226 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| T38A | Y94C | V134A | I158M | L159F | R197K | N202S | Y252* | V271M | % Freq | CORP | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | T | Y | V | I | L | R | N | Y | V | 46.47 | 0.177 |
| 2 | T | Y | A | I | L | K | N | * | M | 35.18 | 1.200 |
| 3 | T | Y | A | I | L | R | S | * | M | 12.90 | 1.200 |
| 4 | T | C | V | M | L | R | N | Y | V | 1.54 | 0.177 |
| 5 | T | Y | A | I | F | K | N | * | M | 1.46 | 1.200 |
| 6 | A | Y | V | I | L | R | N | Y | V | 0.77 | 0.177 |
| 7 | T | Y | A | I | F | K | N | Y | M | 0.38 | 0.177 |
| 8 | T | Y | A | I | L | R | N | * | M | 0.38 | 1.200 |
| 9 | T | Y | V | I | L | R | N | Y | M | 0.31 | 0.177 |
| 10 | T | Y | V | M | L | R | N | Y | V | 0.23 | 0.177 |
| 11 | T | Y | V | I | L | R | S | Y | V | 0.08 | 0.177 |
| 12 | T | Y | V | I | L | R | S | * | M | 0.08 | 1.200 |
| 13 | T | Y | A | I | F | R | N | * | M | 0.08 | 1.200 |
| 14 | T | Y | V | I | L | K | N | Y | V | 0.08 | 0.177 |
| 15 | T | Y | V | I | L | R | N | * | M | 0.08 | 1.200 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR10D3P.aApr07-unspliced | main_exon | 5UTR | chr11 | 124,185,243 | 124,185,270 | + |
| CDS | chr11 | 124,185,270 | 124,186,205 | + | ||
| 3UTR | chr11 | 124,186,205 | 124,186,245 | + | ||