OR10D4P Olfactory Receptor
| Gene Symbol | OR10D4P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | D |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-284, HsOR11.18.16 |
| External Ids | HGNC: 14770 GeneBank: AB065753, BK004632, NG_003196 |
| Build #39 labels | OR10D4, OR10D6P |
| Chromosomal location | 11:124,093,599-124,094,532 (-) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10D1P | 71.77% | 294 |
| 72.2% | 295 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10D4 | 89% | 295 |
| Mouse | Or10d4 | 84% | 295 |
| Mouse | Or10d4c | 83% | 295 |
| Rat | Or10d4 | 84% | 295 |
| Cow | OR10D4 | 83% | 310 |
| Orang | OR10D1 | 71% | 294 |
| Horse | OR10D4 | 86% | 295 |
| Horse | OR10D4D | 85% | 295 |
| Chimp | OR10D4 | 98% | 295 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB529273 |
Sequence information
| Nucleotide sequence |
ATGAGAAATCACACAATGGTGACTGAATTCATCCTTCTGGGAATCCCTGAGACAGAGGGC CTAGAGACAGCCCTTTTATTCCTGTTCTCCTCATTTTATTTATGCACCCTCTTGGGAAAC GTGCTTATCCTTACAGCTATCATCTCCTCCACTCGACTTCACACTCCTATGTATTTTTTC TTGGGAAACCTCTCCATCTTTGACCTGGGTTTCTCTTCAACGACTGTTCCCAAGATGTTG TTCTACCTTTCGGGGAACAGCCATGCTATCTCGTATGCAGGCTGCGTGTCCCAGCTTTTC TTCTACCATTTCCTAGGCTGTACTGAGTGTTTCCTCTACACAGTGATGGCCTGTGACCGC TTTGTTGCCATATGTTTTCCTTTGAGATACACGGTCATCATGAACCACAGGGTGTGCTTT ATGTTGGCCACGGGGACCTGGATGATTGGCTGTGTCCATGCCATGATCCTAACTCCCCTC ACCTTCCAGTTACCTTACTGTGGCCCTAACAAGGTGGGCTATTACTTCTGTGATATTCCT GCAGTGTTACCTCTAGCCTGTAAGGACACATCCTTAGCCCAGAGGGTAGGTTTTACAAAT GTTGGTCTTTTGTCTCTCATTTGCTTTTTTCTCATCCTTGTTTCCTATACTTGCATTGGG ATTTCCATATCAAAAATCCGCTCAGCAGAGGGCAGGCAGCGGGCCTTCTCCACCTGCAGC GCTCACCTCACTGCAATCCTTTGTGCTTATGGGCCAGTCATCGTTATCTATCTACAACCC AATCCCAGTGCCTTGCTTGGTTCCATAATTCAGATATTGAATAATCTGGTAACCCCAATG TTGAATCCACTAATCTATAGCCTTAGGAATAAGGATGTAAAATCAGATCAGCCCTGAGGA ATGTATTTCCCAAGAAAAGCTTTGCTCTGGGAAA |
| Conceptual translation |
MRNHTMVTEFILLGIPETEGLETALLFLFSSFYLCTLLGNVLILTAIISSTRLHTPMYFF LGNLSIFDLGFSSTTVPKMLFYLSGNSHAISYAGCVSQLFFYHFLGCTECFLYTVMACDR FVAICFPLRYTVIMNHRVCFMLATGTWMIGCVHAMILTPLTFQLPYCGPNKVGYYFCDIP AVLPLACKDTSLAQRVGFTNVGLLSLICFFLILVSYTCIGISISKIRSAEGRQRAFSTCS AHLTAILCAYGPVIVIYLQPNPSALLGSIIQILNNLVTPMLNPLIYSLRNKDVKSD\PE ECISQEKLCSGK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI, YRI, YRI, YRI) | |
| 11 | 123,964,778 | 123,964,778 | SNP | A/G | rs11824794 (DbSNP) | |
| 11 | 123,964,849 | 123,964,849 | SNP | C/T | rs17762697 (DbSNP) | |
| 11 | 123,964,967 | 123,964,967 | SNP | T/C | rs668714 (DbSNP) | |
| 11 | 123,965,013 | 123,965,013 | SNP | A/G | rs11219453 (DbSNP) | |
| 11 | 124,094,142 | 124,094,142 | SNP | T/C | 1000GP (CEU) | |
| 11 | 124,094,248 | 124,094,248 | SNP | G/A | 1000GP (CHBJPT) | |
| 11 | 124,094,260 | 124,094,260 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 124,094,306 | 124,094,306 | SNP | A/G | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 123,962,306 | 123,965,339 | Deletion | #230 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.