OR10G9 Olfactory Receptor
Gene Symbol | OR10G91 (View this gene in GeneCards) |
Family | 10 |
Subfamily | G |
Pseudogene | No |
CORP pseudogene probability score | 0.05 (functional) |
Aliases | OR11-272, HsOR11.18.12 |
External Ids | HGNC: 15129 GeneBank: AB065756, BK004760, NM_001001953 |
Build #39 labels | OR10G9, OR10G10P |
Chromosomal location | 11:124,023,013-124,023,945 (+) |
Cluster | 11@124 |
Synteny | CLIC#29 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR10G4 | 94.82% | 309 |
OR10G7 | 90.03% | 311 |
OR10G8 | 88.1% | 311 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR10G9C | 87% | 311 |
Dog | OR10G7BP | 84% | 311 |
Dog | OR10G7 | 84% | 309 |
Mouse | Or10g9 | 87% | 311 |
Mouse | Or10g9b | 86% | 309 |
Mouse | Or10g7 | 87% | 302 |
Rat | Or10g9 | 87% | 309 |
Rat | Or10g9b | 85% | 309 |
Cow | OR10G9E | 82% | 311 |
Cow | OR10G9D | 81% | 311 |
Cow | OR10G4B | 81% | 311 |
Orang | OR10G9I | 91% | 311 |
Orang | OR10G4 | 90% | 311 |
Orang | OR10G7 | 89% | 311 |
Horse | OR10G9J | 86% | 311 |
Horse | OR10G9K | 86% | 311 |
Horse | OR10G7 | 85% | 304 |
Chimp | OR10G9D | 90% | 311 |
Chimp | OR10G7 | 90% | 311 |
Sequence information
Nucleotide sequence |
ATGTCCAAGACCAGCCTCGTGACAGCGTTCATCCTCACGGGCCTTCCCCATGCCCCAGGG CTGGACGCCCCACTCTTTGGAATCTTCCTGGTGGTTTACGTGCTCACTGTGCTGGGGAAC CTCCTCATCCTGCTGGTGATCAGGGTGGATTCTCACCTCCACACCCCCATGTACTACTTC CTCACCAACCTGTCCTTCATTGACATGTGGTTCTCCACTGTCACGGTGCCCAAAATGCTG ATGACCTTGGTGTCCCCAAGCGGCAGGGCTATCTCCTTCCACAGCTGCGTGGCTCAGCTC TATTTTTTCCACTTCCTGGGGAGCACCGAGTGTTTCCTCTACACAGTCATGTCCTATGAT CGCTACTTGGCCATCAGTTACCCGCTCAGGTACACCAGCATGATGAGTGGGAGCAGATGT GCCCTCCTGGCCACCAGCACTTGGCTCAGTGGCTCTCTGCACTCTGCTGTCCAGACCATA TTGACTTTCCATTTGCCCTACTGTGGACCCAACCAGATCCAGCACTATTTGTGTGATGCA CCGCCCATCCTGAAACTGGCCTGTGCAGACACCTCAGCCAACGAGATGGTCATCTTTGTG GACATTGGGCTAGTGGCCTCGGGCTGCTTTCTCCTGATAGTGCTGTCTTATGTGTCCATC GTCTGTTCCATCCTGCGGATCCACACCTCAGAGGGGAGGCACAGAGCCTTTCAGACCTGT GCCTCCCACTGCATCGTGGTCCTTTGCTTTTTTGTTCCCTGTGTTTTCATTTACCTGAGA CCAGGCTCCAGGGACGTCGTGGATGGAGTTGTGGCCATTTTCTACACTGTGCTGACACCC CTTCTCAACCCTGTTGTGTACACCCTGAGAAACAAGGAGGTGAAGAAAGCTGTGTTGAAA CTGAGAGACAAAGTAGCACATTCTCAGGGAGAA |
Conceptual translation |
MSKTSLVTAFILTGLPHAPGLDAPLFGIFLVVYVLTVLGNLLILLVIRVDSHLHTPMYYF LTNLSFIDMWFSTVTVPKMLMTLVSPSGRAISFHSCVAQLYFFHFLGSTECFLYTVMSYD RYLAISYPLRYTSMMSGSRCALLATSTWLSGSLHSAVQTILTFHLPYCGPNQIQHYLCDA PPILKLACADTSANEMVIFVDIGLVASGCFLLIVLSYVSIVCSILRIHTSEGRHRAFQTC ASHCIVVLCFFVPCVFIYLRPGSRDVVDGVVAIFYTVLTPLLNPVVYTLRNKEVKKAVLK LRDKVAHSQGE Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 100 | -100 | NS | C/T | A/V | 1000GP (YRI, YRI, YRI, YRI, YRI) |
11 | 100 | -100 | SYN | G/A | G/G | 1000GP (YRI) |
11 | 123,893,729 | 123,893,729 | NS | G/A | A/T | rs634361 (DbSNP) |
11 | 123,893,791 | 123,893,791 | SYN | A/C/G | P/P | rs3017765 (DbSNP) |
11 | 123,894,119 | 123,894,119 | NS | A/G | M/V | rs12366219 (DbSNP) |
11 | 123,894,126 | 123,894,126 | NS | C/G | T/S | rs17128190 (DbSNP) |
11 | 123,894,136 | 123,894,136 | SYN | A/G | R/R | rs28499345 (DbSNP) |
11 | 123,894,234 | 123,894,234 | NS | A/G | Q/R | rs11219413 (DbSNP) |
11 | 123,894,256 | 123,894,256 | SYN | T/C | D/D | rs2924497 (DbSNP) |
11 | 123,894,339 | 123,894,339 | NS | C/T | S/L | rs12363627 (DbSNP) |
11 | 123,894,361 | 123,894,361 | SYN | G/T | V/V | rs61908611 (DbSNP) |
11 | 123,894,402 | 123,894,402 | NS | A/G | H/R | rs12221656 (DbSNP) |
11 | 123,894,469 | 123,894,469 | SYN | C/T | F/F | rs12577318 (DbSNP) |
11 | 123,894,553 | 123,894,553 | SYN | A/G | L/L | rs61908612 (DbSNP) |
11 | 123,894,556 | 123,894,556 | SYN | A/G | T/T | rs12574086 (DbSNP) |
11 | 123,894,560 | 123,894,560 | NS | C/T | L/F | rs12790359 (DbSNP) |
11 | 123,894,611 | 123,894,611 | NS | C/G | L/V | rs12576297 (DbSNP) |
11 | 124,023,038 | 124,023,038 | NS | C/T | A/V | 1000GP (CHBJPT) |
11 | 124,023,610 | 124,023,610 | NS | G/T | V/L | 1000GP (CHBJPT) |
11 | 124,023,622 | 124,023,622 | NS | C/G | L/V | 1000GP (CHBJPT) |
11 | 124,023,632 | 124,023,632 | NS | C/T | S/L | 1000GP (CEU) |
11 | 124,023,748 | 124,023,748 | NS | G/C | V/L | 1000GP (CEU) |
11 | 124,023,846 | 124,023,846 | SYN | G/A | L/L | 1000GP (CEU) |
11 | 124,023,849 | 124,023,849 | SYN | A/G | T/T | 1000GP (CEU, CHBJPT) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
11 | 123,885,722 | 123,894,275 | CopyNumber | Variation_101364 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
A9V | M134V | Q172R | Y176C | V200L | I202F | S207L | H228R | V267M | D268G | % Freq | CORP | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | A | M | Q | Y | V | I | S | H | V | D | 37.02 | 0.138 |
2 | A | V | Q | Y | V | I | S | H | V | D | 24.19 | 0.138 |
3 | A | M | R | Y | V | I | S | R | V | D | 20.35 | 0.138 |
4 | V | M | R | C | L | I | S | R | V | D | 6.99 | 0.118 |
5 | V | M | Q | Y | V | I | S | H | V | D | 3.15 | 0.138 |
6 | A | M | Q | Y | V | F | S | H | V | D | 2.00 | 0.138 |
7 | A | M | R | Y | V | I | S | H | V | D | 1.23 | 0.138 |
8 | A | M | Q | Y | V | I | S | H | M | D | 0.92 | 0.138 |
9 | A | M | Q | Y | V | I | S | H | V | G | 0.77 | 0.138 |
10 | V | M | R | C | L | I | S | H | V | D | 0.69 | 0.118 |
11 | A | V | Q | Y | V | I | L | H | V | D | 0.61 | 0.138 |
12 | A | M | Q | Y | V | I | S | R | V | D | 0.38 | 0.138 |
13 | A | M | R | C | L | I | S | R | V | D | 0.31 | 0.118 |
14 | A | V | Q | Y | V | I | S | H | V | G | 0.23 | 0.138 |
15 | A | V | Q | Y | V | I | S | R | V | D | 0.15 | 0.138 |
16 | V | M | R | Y | V | I | S | R | V | D | 0.15 | 0.138 |
17 | V | M | Q | Y | V | I | L | H | V | D | 0.08 | 0.138 |
18 | A | M | Q | Y | L | I | S | R | V | D | 0.08 | 0.138 |
19 | A | M | Q | Y | V | F | S | R | V | D | 0.08 | 0.138 |
20 | V | M | R | C | V | I | S | H | V | D | 0.08 | 0.118 |
21 | V | M | Q | Y | V | I | S | R | V | D | 0.08 | 0.138 |
22 | A | M | R | C | L | I | S | H | V | D | 0.08 | 0.118 |
23 | A | M | R | Y | V | I | S | R | V | G | 0.08 | 0.138 |
24 | A | M | Q | Y | V | I | L | H | V | D | 0.08 | 0.138 |
25 | V | M | R | C | V | I | S | R | V | D | 0.08 | 0.118 |
26 | A | V | Q | Y | V | F | S | H | V | D | 0.08 | 0.138 |
27 | V | M | R | Y | V | I | S | H | V | D | 0.08 | 0.138 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
Accession | Type | Chr | Start | End | Strand | |
---|---|---|---|---|---|---|
OR10G9.aApr07-unspliced | main_exon | CDS | chr11 | 124,023,013 | 124,023,945 | + |
3UTR | chr11 | 124,023,945 | 124,023,948 | + |