OR10J8P Olfactory Receptor
| Gene Symbol | OR10J8P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | J |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR1.4.23P |
| External Ids | HGNC: 19638 GeneBank: NG_004308 |
| Build #39 labels | OR10J8P |
| Chromosomal location | 1:159,366,161-159,367,086 (+) |
| Cluster | 1@159b |
| Synteny | CLIC#4 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10J1 | 79.94% | 309 |
| OR10J2P | 77.12% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10J8 | 82% | 309 |
| Mouse | Or10j2 | 77% | 307 |
| Rat | Or10j2 | 76% | 307 |
| Cow | OR10J1 | 81% | 309 |
| Cow | OR10J1B | 81% | 280 |
| Orang | OR10J8 | 95% | 305 |
| Horse | OR10J1C | 85% | 309 |
| Chimp | OR10J8 | 96% | 309 |
Sequence information
| Nucleotide sequence |
ATGAAGAAAGAGAATCACTCTTTGATGAATGTGTTTATTTTTCAAGGTTTCTCCAGCTTC CGTGAGCACAAGCTCACCCTCTTTGTTGTGTTTCTTACGTTGTACATATTCTCCCTGGCA GGCAATGTTATCATTGTGAGTATCATTAGTATTGATCGTCACCTCCACACCCCCATGTAC TTCTTCGTCAGCATGCTGTCAGGTTCAGAGACTGTCTACACCCTTGTCATTATACCAAGG ATGCTGTTTAACCTCATAGGCCTGAGTCAGCCCATTTCCTTGGCAGGTTGTGCCACTCAG ATGTTTTTCTTCATTACTTTGGCTATCAACAACTGCTTCCTGCTCACAGCAATGGGGTAT GACCGCTATGTGACCATCTGCAACCCCTTGAGGTACTCAGTCGTCATGAGCAAGAGAGTG TGTATGCAGCTGGTGTGAGGGGCCTGCAGCATTGGCCTAATTGTAGCAATGACACAGGTG TCAGCTGTATTCAGGCTGCCTTTCTGTATTCCAAAGGTGCCTCACTTCTTCTGTGACATC CGACCTGTAATGAAGCCCTCCTGCATTGACACCACAGTCAATGAAATCCTGACTATGATC ATCAGTGTGCTGGTGATCCTCATTCCCATGGGCTTGGTTTTCATCTCCTACATCCTCATC ATTTCTACCATCCTCAAGATTGCCTCTGCCGAGGGCAGGAAAAAGGCCTTTGCCACCTGT GCTTCTCATATTACTGTGGTTATTGTCCACTATGGCTGTGCCTCCATTGCTTACTTCAAT TCCAAGTCAGAGAACACAGAGATCAGGATCAGCTGATCTCAGTGACCTACACTGTCATTA CCCCGTTACTGAACCCTGTGGTGTACACTCTGAGGAACAAAGAGGTCAAAGATGCTCTGT GCAGAGTGATAGGTCAAAAATTCTCC |
| Conceptual translation |
MKKENHSLMNVFIFQGFSSFREHKLTLFVVFLTLYIFSLAGNVIIVSIISIDRHLHTPMY FFVSMLSGSETVYTLVIIPRMLFNLIGLSQPISLAGCATQMFFFITLAINNCFLLTAMGY DRYVTICNPLRYSVVMSKRVCMQLVXACSIGLIVAMTQVSAVFRLPFCIPKVPHFFCDI RPVMKPSCIDTTVNEILTMIISVLVILIPMGLVFISYILIISTILKIASAEGRKKAFATC ASHITVVIVHYGCASIAYFNSKSENT/DQDQLISVTYTVITPLLNPVVYTLRNKEVKDA LCRVIGQKFS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 100 | -100 | SNP | T/A | 1000GP (YRI, YRI, YRI, YRI, YRI) | |
| 1 | 159,336,104 | 159,336,104 | SNP | A/G | rs12144483 (DbSNP) | |
| 1 | 159,336,315 | 159,336,315 | SNP | A/G | rs7515532 (DbSNP) | |
| 1 | 159,336,624 | 159,336,624 | SNP | G/T | rs4376733 (DbSNP) | |
| 1 | 159,366,314 | 159,366,314 | SNP | G/A | 1000GP (CEU) | |
| 1 | 159,366,344 | 159,366,344 | SNP | T/C | 1000GP (CEU) | |
| 1 | 159,366,346 | 159,366,346 | SNP | C/T | 1000GP (CHBJPT) | |
| 1 | 159,366,627 | 159,366,627 | SNP | C/A | 1000GP (CEU) | |
| 1 | 159,366,726 | 159,366,726 | SNP | T/A | 1000GP (CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 1 | 159,335,851 | 159,338,876 | CopyNumber | #132 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.