OR10V3P Olfactory Receptor
| Gene Symbol | OR10V3P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | V |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3639 |
| External Ids | HGNC: 15138 GeneBank: NG_004247 ORDB: ORL3639 |
| Build #39 labels | OR10V3P |
| Chromosomal location | 11:59,741,325-59,742,049 (+) |
| Cluster | 11@59b |
| Synteny | CLIC#27 |
| Remarks | Disrupted by MIR repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10V2P | 64.15% | 106 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10V5 | 66% | 115 |
| Mouse | Or10v5 | 66% | 117 |
| Rat | Or10v9 | 61% | 119 |
| Cow | OR10V1 | 54% | 104 |
| Orang | OR10V2P | 60% | 119 |
| Horse | OR10V13 | 63% | 115 |
| Chimp | OR10BL1P | 97% | 111 |
Sequence information
| Nucleotide sequence |
CCTCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCAGCCA ACTTTCTTTTTTTAAACTAAAGATGTCAGGCAGGCCATAGCTCAGCTTTAGGTGGCCCCC CTCTGACACTCACGGTCTCTTTTTGCTGATTACCCACAATAGTGGAGGAAGATCCACATA TAAAGTCAAAAGTCTAGGTTAAAATCCCACATCAGCCACTGATGAACTGTGCAAGCTTGG AAAAATCATTTCACCTCTGTGAATTGTGGTTTTGCCATCTGCAGAGCTGAATGTTAACCA TAGCCCAAGATACTAAGTATTATAGGATTGAAATGAAATATAAATGAAACTTTGTAAATG TTAAATTATAACACAAATCATATGGTCAGTGTCGATGTCCTAATTGTTCCTAACTCCTCA TCACACTCTCCTACTTCTTCATTGTGGCTGCCATCCTGATATCCGCTCTGCAGAGGGGAG GCACAAGGCTTTTCCCACCTGCTCCTTCCACCTGGTTTAATTCTCCTCCAGCACAATGAA CAAGCCTCACCTATTTGTGCCCCAGCTCCATCTTCTCTTATGAGAGGGGCAAGGTAGTGT CTACGGTTTACACATGCATCACTCCTGTGCCAAACCCCTTGATCTGCAGCATGAGGAAGA AGGAACTCAAGCATGCTCTTAAAAAAAAAGAAGAAATTGCAAGGTTCTTGCTGCTCAGAA CACAT |
| Conceptual translation |
PPTLASQSAGITGMSHHAQPTFFFXKDVRQAIAQLXAPLXSRSLFADYPQXRKIHI XQKSRLKSHISHXTVQAWKNHFTSVNCGFAICRAECXXKILSIIGLKXINETLX LNYNTNHMVSVDVLIVP/LLITLSYFFIVAAIL/IRSAEGRHKAFPTCSFHLV/ILL QHNEQA/TYLCPSSIFSYERGKVVSTVYTCITPVPNPLICSMRKKELKHALKKKEEIAR FLLLRTH Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 59,509,003 | 59,509,002 | Ins(1) | -/C | rs35877329 (DbSNP) | |
| 11 | 59,509,074 | 59,509,074 | SNP | A/T | rs7926513 (DbSNP) | |
| 11 | 59,509,156 | 59,509,156 | SNP | C/T | rs60984215 (DbSNP) | |
| 11 | 59,741,503 | 59,741,503 | SNP | T/A | 1000GP (CEU) | |
| 11 | 59,741,601 | 59,741,601 | SNP | A/T | 1000GP (CEU, CHBJPT) | |
| 11 | 59,741,692 | 59,741,692 | SNP | A/G | 1000GP (CEU) | |
| 11 | 59,741,921 | 59,741,921 | SNP | G/A | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | A/T | 1000GP (YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.