OR10Y1P Olfactory Receptor
| Gene Symbol | OR10Y1P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | Y |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-254, HsOR11.13.14P, ORL3633 |
| External Ids | HGNC: 15140 GeneBank: BK004737, NG_004245 ORDB: ORL3633 |
| Build #39 labels | OR10Y1P |
| Chromosomal location | 11:59,728,519-59,729,492 (+) |
| Cluster | 11@59b |
| Synteny | CLIC#27 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10V1 | 45.16% | 310 |
| OR10V2P | 48.66% | 261 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10V10 | 63% | 327 |
| Mouse | Or10q3 | 62% | 321 |
| Rat | Or10v9 | 46% | 318 |
| Cow | OR10V1 | 44% | 311 |
| Orang | OR10V1 | 45% | 310 |
| Horse | OR10V11 | 63% | 327 |
| Chimp | OR10V1 | 46% | 310 |
Sequence information
| Nucleotide sequence |
ATGGAAGAGGAAAACCAGAGGGGAGTGGTACACTTCCACTTCCACTTCTTTTCAACAGAC CTGGTGGTGGCTTCCTTTATAATTGTGGCCTTGATGTTGCACCAAGAAGCCTTGTTGGAC ACTTCACCTTTGGGCCCACAGTCTGGCAAGATCCCTTCCTCCATATTCCAATGTATTTAT TTTTATTTTTTTGGCATTGACTATGTTGGAAATTGGCTACTCCACCAACATTTCTCCTCC AACACTGGCTACCGTCCTTTACATGGGGAAGATGCTTATCTCCCTCCCTGGCTATGGAAC TCAGATGCTCTTTGTCATCCTTTTGAGAGGATCTGAGTGTGTCTTGCTTGCTGTCATGGC TTATGATAGGTATATAACCATCTGTCATCCATTCAATTACAATCTCATCATGAGTGGGTA GCTCTGTGGGCAGATGACTTTGGGCTCTTTGAGGCTGGGATTCCTGTTGTCACTGTTTTT GACTATGTTGATCTGACACCCTCCATTCTGTGGCCTAATGAAACCTACCACTTCTTCTGT GACATGCCCACAGCAAGTGCCTGGTCTGTGCAGACACCACATGCATGAGTCAGCTCTCTG ACTTCCGTGTGGCCACCATCACCATCCCCTTCCTTCCTCCTTGTCTGCCTCCCCTATGGC TGCCTTGCAGCCACCATCTTGAGGATGCATTCAGCTAAGAGAAAGCACTAGGCCTTCTCT ACCAGTTCCTCCCACCTCATTGTGGTTCTCCTGAAGTATTGGTGTTGCATCCTCATCTGC CTTTGCCCCAGCTCTAGTTACTCCCCAGAGGAGGGCTGGGAGGTATCTCTTGTTCACATG TTTTTCTCCCGGTGTGGAATCCCTTGATCTATAGCGTATGGAACCAAGACGTAACTGATG CAGTAGAGAGACTTGTGGCAAGAATGTCCTTGTTCTAACAGCCAGAAATATTCCTTCTTA AAAAATATTTCCCT |
| Conceptual translation |
MEEENQRGVVHFHFHFFSTDLVVASFIIVALMLHQ/SLVGHFTFGPTVWQDPFLHIPMY LFL/FLALTMLEIGYSTNISPPTLATVLYMGKMLISLPGYGTQMLFVILLRGSECVLLA VMAYDRYITICHPFNYNLIMSGXCGQMTLGSLRLGFLLSLFLTMLIXPPFCG/NETY HFFCDMPTASAWSVQTPHAXSSLTSVWPPSPSPSFLLVCLPYGCLAATILRMHSAKRKH XFSTSSSHLIVVLLKYWCCILICLCPSSSYSPEEGWEVSLVH/VFLPVWNPLIYSVWN QDVTDAVERLVARMSLFXPEIFLLKKYFP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 59,496,692 | 59,496,692 | SNP | A/G | rs526672 (DbSNP) | |
| 11 | 59,729,219 | 59,729,219 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 36 (Hasin) | |||
| 11 | 59,495,892 | 59,498,965 | CopyNumber | #81 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.