OR11H2 Olfactory Receptor
| Gene Symbol | OR11H21 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | H |
| Pseudogene | No |
| CORP pseudogene probability score | 0.3 (functional) |
| Aliases | OR14-1, HsOR14.1.1 |
| External Ids | HGNC: 14716 GeneBank: AB065607, BK004489, NG_002568, NG_004141 |
| Build #39 labels | OR11H2P |
| Chromosomal location | 14:19,712,939-19,713,883 (-) |
| Cluster | 14@20b |
| Synteny | CLIC#32 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11H1 | 98.41% | 315 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11H12 | 82% | 310 |
| Mouse | Or11h6 | 66% | 298 |
| Rat | Or11h4d | 62% | 313 |
| Cow | OR11H12 | 83% | 315 |
| Cow | OR11H12B | 82% | 315 |
| Orang | OR11H12 | 93% | 315 |
| Orang | OR11H12CP | 91% | 315 |
| Orang | OR11H12D | 91% | 315 |
| Horse | OR11H12 | 86% | 315 |
| Chimp | OR11H12 | 96% | 315 |
Sequence information
| Nucleotide sequence |
ATGAATGTCTCTGAGCCAAATTCCAGCTTTGCTTTTGTAAATGAATTTATACTCCAAGGT TTCTCTTGTGAGTGGACAATTCAGATCTTCCTCTTCTCACTCTTTACTACAATATATGCA CTGACTATAACAGGGAATGGAGCCATTGCTTTTGTCCTGTGGTGTGACCGGCGACTTCAC ACTCCCATGTACATGTTCCTGGGAAATTTCTCCTTTTTAGAGATATGGTATGTCTCTTCT ACAGTTCCCAAGATGTTGGTCAACTTCCTTTCAGAGAAAAAAAACATCTCCTTTGCTGGA TGTTTTCTCCAGTTTTATTTCTTCTTCTCTTTGGGTACATCAGAATGCTTGCTTTTGACT GTGATGGCCTTTGATCAGTACCTTGCTATCTGCCGTCCCTTGCTCTATCCTAATATCATG ACTGGGCATCTCTATGCCAAACTGGTCATACTGTGCTGGGTTTGTGGATTTCTGTGGTTC CTGATCCCCATTGTTCTCATCTCTCAGAAGCCCTTCTGTGGCCCAAACATTATTGACCAT GTTGTGTGTGACCCAGGGCCACTATTTGCATTGGATTGTGTTTCTGCCCCAAGAATCCAA CTGTTTTGCTACACTCTAAGCTCATTAGTTATTTTTGGTAACTTCCTCTTTATTATTGGA TCCTATACTCTTGTCCTGAAAGCTGTGTTGGGTATGCCTTCAAGCACTGGGAGACATAAG GCCTTCTCTACCTGTGGGTCTCATTTGGCTGTGGTATCACTGTGCTATAGCCCTCTTATG GTCATGTATGTGAGCCCAGGACTCGGACATTCTACAGGGATGCAGAAAATTGAAACTTTG TTCTATGCTATGGTGACCCCACTCTTCAATCCCCTTATCTATAGCCTCCAGAATAAGGAG ATAAAGGCAGCCCTGAGGAAAGTTCTGGGGAGTTCCAACATAATC |
| Conceptual translation |
MNVSEPNSSFAFVNEFILQGFSCEWTIQIFLFSLFTTIYALTITGNGAIAFVLWCDRRLH TPMYMFLGNFSFLEIWYVSSTVPKMLVNFLSEKKNISFAGCFLQFYFFFSLGTSECLLLT VMAFDQYLAICRPLLYPNIMTGHLYAKLVILCWVCGFLWFLIPIVLISQKPFCGPNIIDH VVCDPGPLFALDCVSAPRIQLFCYTLSSLVIFGNFLFIIGSYTLVLKAVLGMPSSTGRHK AFSTCGSHLAVVSLCYSPLMVMYVSPGLGHSTGMQKIETLFYAMVTPLFNPLIYSLQNKE IKAALRKVLGSSNII Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 20,181,930 | 20,181,930 | NS | A/G | I/T | rs61979610 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 19,662,531 | 20,556,187 | CopyNumber | Variation_3929 (DGV) |
| 14 | 20,080,166 | 20,271,356 | CopyNumber | Variation_4824 (DGV) |
| 14 | 20,095,109 | 20,231,601 | CopyNumber | Variation_4825 (DGV) |
| 14 | 19,117,183 | 20,424,605 | CopyNumber | Variation_7028 (DGV) |
| 14 | 20,177,234 | 20,424,604 | CopyNumber | Variation_30648 (DGV) |
| 14 | 19,360,239 | 20,424,604 | CopyNumber | Variation_31953 (DGV) |
| 14 | 19,670,757 | 20,331,117 | CopyNumber | Variation_37621 (DGV) |
| 14 | 19,349,922 | 20,424,856 | CopyNumber | Variation_58655 (DGV) |
| 14 | 20,177,210 | 20,424,753 | CopyNumber | Variation_66584 (DGV) |
| 14 | 19,781,170 | 20,424,776 | CopyNumber | Variation_71833 (DGV) |
| 14 | 20,020,589 | 20,197,401 | CopyNumber | Variation_71835 (DGV) |
| 14 | 19,780,325 | 20,202,019 | CopyNumber | Variation_71861 (DGV) |
| 14 | 20,152,622 | 20,419,574 | CopyNumber | Variation_76554 (DGV), Variation_87112 (DGV) |
| 14 | 20,152,622 | 20,190,758 | CopyNumber | Variation_87114 (DGV) |
| 14 | 20,152,622 | 20,212,550 | CopyNumber | Variation_87115 (DGV) |
| 14 | 20,179,862 | 20,261,582 | CopyNumber | Variation_87116 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.