OR11H5P Olfactory Receptor
| Gene Symbol | OR11H5P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | H |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-31, HsOR14.1.26P, ORL3710 |
| External Ids | HGNC: 15348 GeneBank: BK004618, NG_004353 ORDB: ORL3710 |
| Build #39 labels | OR11H5P |
| Chromosomal location | 14:20,209,297-20,210,195 (+) |
| Cluster | 14@20b |
| Synteny | CLIC#32 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11H4 | 68.01% | 297 |
| OR11H6 | 68.35% | 297 |
| OR11H7P | 66.22% | 296 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11H6 | 68% | 300 |
| Mouse | Or11h4 | 69% | 297 |
| Rat | Or11h4 | 69% | 297 |
| Cow | OR11H7 | 69% | 297 |
| Orang | OR11H5 | 96% | 286 |
| Horse | OR11H5 | 85% | 300 |
| Chimp | OR11H5 | 97% | 300 |
Sequence information
| Nucleotide sequence |
ATGACGGAATTTGTTCTCCTTGGCTTTCCTGGTTGTCAGGAGATGCAAAGTTTCCTCTTC TCCCTGTTCTTTGTGATCTATGTATTTACCATAATAGGAAATGGGACCATTGTCTGTGCT GTGAGATTGGACAAACGGCTTCATACCCCAATGTATATTCTCCTAGGGAACTTTGCTTTC CTTGAAATCCGGTAAGTTACTTCCACTGTACCCAACATGCTAGTCAACTTCCTCTCAGAG ACAAAAACCATCTCTTTTGTTGGCTGTTTCCTCCAGTTCTACTTTTTTACTTCCCTTGGT ACAATAGAAGCATACTTCCTCTGCATCATGGCATATGATCGGTACCTTGCTATCTGCCGC CCATTGCACTACCCAACCATCATGACCCCACAACTCTGCTACATATTGATGTCTTTTTGC TGGGTGTTTGGATTCCTCAGTTACTCTGTCTCCACTGTGCAACTGTCTCAACTGCCTTTC TGTGGGCCCAACATCATCAATCACTTTTTGTGTGACATGGACCCACTGATGGCTCTGTCC TGTGCCTCAGCTCCTATCACTGAGATTATCTTCTATATCCTGAGCTCCCTCATTATCATT CTCACTCTTCTGTACATCTGTGGCTCCTATATGCTTTACTGATAGCTGTATTAAAAGTCC CTTCAGCAGCTGGCCAGCAGAAGGCCTTTTCCACCTGTGGATCTCATCTGACAGTGGTGT GTTTATTCTTTGGGGCCCTACTGGCAATGTATGTGAGCCCCACAACTGATAACCCAGCTG CAATTTAGAAGATTATAACTTTGTTCTATTCTGTGGTGACCCCCTTCTTAAACCCCCTGA TTTACAGCTTACGAAACAAAGAGATGAAGGCTGCGTTGAAGAAAGTCCTGAGGATAGAA |
| Conceptual translation |
MTEFVLLGFPGCQEMQSFLFSLFFVIYVFTIIGNGTIVCAVRLDKRLHTPMYILLGNFAF LEIRXTSTVPNMLVNFLSETKTISFVGCFLQFYFFTSLGTIEAYFLCIMAYDRYLAICR PLHYPTIMTPQLCYILMSFCWVFGFLSYSVSTVQLSQLPFCGPNIINHFLCDMDPLMALS CASAPITEIIFYILSSLIIILTLLYICGSYM/LLIAVLKVPSAAGQQKAFSTCGSHLTV VCLFFGALLAMYVSPTTDNPAAIXIITLFYSVVTPFLNPLIYSLRNKEMKAALKKVLRI E Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 20,677,621 | 20,677,620 | Ins(1) | -/A | rs35095838 (DbSNP) | |
| 14 | 20,677,814 | 20,677,814 | SNP | A/G | rs8012050 (DbSNP) | |
| 14 | 20,678,002 | 20,678,002 | SNP | C/T | rs8004680 (DbSNP) | |
| 14 | 20,677,591 | 20,677,591 | SNP | C/T | rs9944095 (DbSNP) | |
| 14 | 20,677,723 | 20,677,723 | SNP | G/T | rs11628841 (DbSNP) | |
| 14 | 20,209,432 | 20,209,432 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 14 | 20,209,564 | 20,209,564 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 14 | 20,209,655 | 20,209,655 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 14 | 20,209,843 | 20,209,843 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 14 | 20,209,387 | 20,209,387 | SNP | A/G | 1000GP (CHBJPT) | |
| 14 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 20,203,125 | 20,716,841 | CopyNumber | Variation_8765 (DGV) |
| CopyNumber | 113 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.