OR11J6P Olfactory Receptor
| Gene Symbol | OR11J6P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | J |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-36, HsOR11.3.54 |
| External Ids | HGNC: 38588 |
| Build #39 labels | OR51V1, OR51A12 |
| Chromosomal location | 15:21,542,999-21,543,958 (-) |
| Cluster | 15@22 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11J6 | 85% | 321 |
| Mouse | Or11j4 | 60% | 309 |
| Rat | Or11j4 | 60% | 309 |
| Cow | OR11J6 | 84% | 321 |
| Orang | OR11J2P | 68% | 310 |
| Horse | OR11J6 | 86% | 320 |
| Chimp | OR11J5P | 93% | 317 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BF328901 |
| GNF Atlas2 | gnf1h10910_at |
Sequence information
| Nucleotide sequence |
ATGAGTGTCATAGAAGCCAATAACATTTCTGGGCCTGTGAGTGAATTTATCCTCCTGGGC TTCCCCTGCCTGCTGCAGGGAGACCAAGATCCTCCTCTTTGTGGTCTTCTCCCTCATCTA CCTTCTGACCCTCATGGGTAACACATCCATCATCTGCGCTGTGTGGTCAAGCCAGAAACT CCACACACCTATGTACATCCTCTTGGCTAATTTCTCTTTCCTGGAGATCTGCTGCATTAG TTCTGATGTCCCAAAATGTTGGCCAATCTCATCTCCCATATCAAGAGCATCTCCTATGCT GGCTGCCTGCTCCAGTTCTTCTACTTCTCCATGTGTGCTGCAGAAGGCTACTTTCTGTCT GTGATGTCCTTTGATCGGTTCCTTACCATCTGTCGACCTTTGCATTATCCCACAGTCATG ACTCACCACCTGTGTGTCCGATTAGTGGCCTTCTGCAGGGCAGGTGGTTTTCTATCCATA CTGATGCCTGCAGTGCTTATGTCCCGAGTGCCTTTCTGTGGCCCTAACATCACTGACCAT TTTTTCTGTAACCTGGGACCATTGCTGGCACTGTCCTGTGCCCCAGTTCCCAAAACTACT CTGACTTGTGCTACAGTAAGCTCTCTCATCATCTTCATCACCTTCCTCTACATTCTTGGG TCCCATATCTTAGTTTTGCGAGCTGTTCTGTGGGTCCCAGCTGGCTCAGGCAGGAACAAA GCTTTCTCTACATGTGCTTCCCATTTCTTGGTTGTTTCTTTCTTCTATGGCTCAGTCATG GTGATGTATGTGAGTCCAGGCTCCAGGAGCCGCCCTGGGACACAGAAATTTGTGACATTG TTTTACTGCACAGCAACCCCATTCTTTAATCCCCTGACCTACAGTCTCTGGAACAAAGAT ATGACAGATGCCCTTAAAAAAGTGCTGGGAGTGCCATCAAAAGAAATATCTTGGAACACA |
| Conceptual translation |
MSVIEANNISGPVSEFILLGFP\CCRETKILLFVVFSLIYLLTLMGNTSIICAVWSSQK LHTPMYILLANFSFLEICCIS/XPKMLANLISHIKSISYAGCLLQFFYFSMCAAEGYF LSVMSFDRFLTICRPLHYPTVMTHHLCVRLVAFCRAGGFLSILMPAVLMSRVPFCGPNIT DHFFCNLGPLLALSCAPVPKTTLTCATVSSLIIFITFLYILGSHILVLRAVLWVPAGSGR NKAFSTCASHFLVVSFFYGSVMVMYVSPGSRSRPGTQKFVTLFYCTATPFFNPLTYSLWN KDMTDALKKVLGVPSKEISWNT Protein domains and features |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 15 | 20,003,725 | 23,814,757 | CopyNumber | Variation_3951 (DGV) |
| 15 | 20,143,651 | 23,690,892 | CopyNumber | Variation_3070 (DGV) |
| 15 | 20,161,372 | 22,351,239 | CopyNumber | Variation_49466 (DGV) |
| 15 | 20,161,372 | 22,368,110 | CopyNumber | Variation_49467 (DGV) |
| 15 | 20,161,372 | 22,449,059 | CopyNumber | Variation_49468 (DGV), Variation_49469 (DGV) |
| 15 | 20,161,372 | 22,755,185 | CopyNumber | Variation_49470 (DGV) |
| 15 | 20,161,372 | 23,226,254 | CopyNumber | Variation_49471 (DGV) |
| 15 | 20,167,086 | 22,588,036 | CopyNumber | Variation_8779 (DGV) |
| 15 | 20,167,086 | 22,862,959 | CopyNumber | Variation_34576 (DGV) |
| 15 | 20,167,086 | 22,869,764 | CopyNumber | Variation_8781 (DGV) |
| 15 | 20,167,086 | 23,222,284 | CopyNumber | Variation_9251 (DGV), Variation_34504 (DGV) |
| 15 | 20,167,086 | 23,854,707 | CopyNumber | Variation_8784 (DGV) |
| 15 | 20,167,089 | 22,588,036 | CopyNumber | Variation_9250 (DGV) |
| 15 | 20,167,089 | 22,869,763 | CopyNumber | Variation_34665 (DGV) |
| 15 | 20,167,089 | 23,222,284 | CopyNumber | Variation_34608 (DGV) |
| 15 | 20,171,787 | 22,646,418 | CopyNumber | Variation_31980 (DGV) |
| 15 | 20,198,198 | 22,591,284 | CopyNumber | Variation_30670 (DGV) |
| 15 | 20,266,957 | 22,674,466 | CopyNumber | Variation_0318 (DGV) |
| 15 | 20,397,403 | 22,698,551 | CopyNumber | Variation_7046 (DGV) |
| 15 | 20,422,586 | 22,588,019 | CopyNumber | Variation_34663 (DGV) |
| 15 | 20,541,678 | 22,368,898 | CopyNumber | Variation_58702 (DGV) |
| 15 | 20,610,110 | 22,575,858 | Inversion | Variation_0443 (DGV) |
| 15 | 20,625,544 | 22,559,977 | Inversion | Variation_0444 (DGV) |
| 15 | 20,851,594 | 22,588,036 | CopyNumber | Variation_34545 (DGV) |
| 15 | 20,852,150 | 23,222,284 | CopyNumber | Variation_8785 (DGV) |
| 15 | 20,879,638 | 22,777,875 | CopyNumber | Variation_9254 (DGV) |
| 15 | 20,935,075 | 22,777,875 | CopyNumber | Variation_8783 (DGV) |
| 15 | 21,012,524 | 23,222,284 | CopyNumber | Variation_9256 (DGV) |
| 15 | 21,054,356 | 22,453,425 | CopyNumber | Variation_76814 (DGV), Variation_87462 (DGV) |
| 15 | 21,072,035 | 22,588,019 | CopyNumber | Variation_34607 (DGV) |
| 15 | 21,097,124 | 22,449,059 | CopyNumber | Variation_9742 (DGV) |
| 15 | 21,200,251 | 22,588,036 | CopyNumber | Variation_8786 (DGV) |
| 15 | 21,276,422 | 22,453,425 | CopyNumber | Variation_87468 (DGV) |
| 15 | 21,362,809 | 22,453,425 | CopyNumber | Variation_76815 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.