OR11K1P Olfactory Receptor
Gene Symbol | OR11K1P1 (View this gene in GeneCards) |
Family | 11 |
Subfamily | K |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | OR15-7, HsOR15.1.5P, ORL3727 |
External Ids | HGNC: 15371 GeneBank: AB065906, BK004799, NG_004163 ORDB: ORL3727 |
Build #39 labels | OR11K1P |
Chromosomal location | 15:22,030,903-22,031,831 (-) |
Cluster | 15@22 |
Synteny | CLIC#32 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR11K2P | 90.1% | 313 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR11K2 | 79% | 312 |
Mouse | Or11g2 | 57% | 303 |
Rat | Or11j4 | 57% | 298 |
Cow | OR11K2 | 73% | 311 |
Orang | OR11K2 | 88% | 313 |
Orang | OR11K2B | 86% | 313 |
Orang | OR11K2C | 86% | 313 |
Horse | OR11K6 | 78% | 312 |
Chimp | OR11G2 | 58% | 296 |
Expression evidences
Source | Accession |
---|---|
ESTs | DB450174 |
mRNA | AB529228 |
Sequence information
Nucleotide sequence |
ATGGAAACTATCAATTTTGTTAGCTGCCTTATCCTCATGGGCTTTCCCTCAAGCCCAGAA ATGCAGCTCCTCTACTTCGGTCTCTTCTCAGTAGCCTATACTCTCACCCCGATGGGAAAT GCAGCCATTGTCTGTGCTGTGTGGTAGGACCAGCACCTTCACACTCCCATGTACACCCTC TTGGGAAATTTCTCTCTCCTGGAAATATGTTATGTTACTGCAACTAAACTGCTGGCCAAC TTCCTCTCCACAAGCAAGTCCATCTCATTCATGAGTTGTTTTGCACAGTTCTACTTCTTC TCTTTGGGGTATGATGAGGGCTTCTTCCTTTGCATCACGGCCTTTGACAGGTATCTTGCC ATCTGCCGCCCTCTACGTTATCCATGCATCATGACTAAACAAGTATGCACTGGCCTCATC ATTTTTGCATGGTCATGTGTCTTTGTAATCTTCCTAACTCTGGTGATTCTCATTTCACAG CTATCCTACTGTGGCCCAAATATTATCAACCATTTTATTTGTGATCCCGTCCCATTGAAG ATGCTGTCCTGTTCTGAAGACATCATCATCACCCAGCTCATTTACTCCACATTCAATTCT GTCTTCATAATTGGCACCTTTCTCTTTATCCTTTGTTCCTATGCTCTGGTGATTCTGGCT ATAATACGGATGCCTTCAGAGGCTGGCAAACGAAAAGCTTTCTCCACTTGTGCCTCTCAT TTGGCAGTTGTCACCTTATTTTATGGCTCTATCATGGTGATGTATGTTAGTCCTGGATCA GCACACCCAGTAAAAATGAAAAAATCATTACCTTGTTCTTTTCTGTGATAACACCACTCT GTAATCCTCTAATATATAGTCTCAGGAACAAAGAGATGAAAGATTATCTGAGGAAAATCT TCAGGACTGGAAAAGATGTTAATAAAATA |
Conceptual translation |
METINFVSCLILMGFPSSPEMQLLYFGLFSVAYTLTPMGNAAIVCAVWXQHLHTPMYTL LGNFSLLEICYVTATKLLANFLSTSKSISFMSCFAQFYFFSLGYDEGFFLCITAFDRYLA ICRPLRYPCIMTKQVCTGLIIFAWSCVFVIFLTLVILISQLSYCGPNIINHFICDPVPLK MLSCSEDIIITQLIYSTFNSVFIIGTFLFILCSYALVILAIIRMPSEAGKRKAFSTCASH LAVVTLFYGSIMVMYVSPGSAH/SKNEKIITLFFSVITPLCNPLIYSLRNKEMKDYLRK IFRTGKDVNKI Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
15 | 100 | -100 | SNP | A/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
15 | 22,031,012 | 22,031,012 | SNP | A/T | 1000GP (CEU, CHBJPT) | |
15 | 22,031,302 | 22,031,302 | SNP | A/G | 1000GP (CHBJPT) | |
15 | 22,031,344 | 22,031,344 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
15 | 22,031,438 | 22,031,438 | SNP | T/A | 1000GP (CHBJPT) | |
15 | 22,031,494 | 22,031,494 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
15 | 22,031,532 | 22,031,532 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
15 | 22,031,614 | 22,031,614 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
15 | 22,031,830 | 22,031,830 | SNP | A/G | 1000GP (CHBJPT) | |
15 | 22,318,917 | 22,318,916 | Ins(1) | -/C | rs35152413 (DbSNP) | |
15 | 22,318,963 | 22,318,963 | SNP | A/T | rs1429506 (DbSNP) | |
15 | 22,319,079 | 22,319,079 | SNP | A/G | rs28509257 (DbSNP) | |
15 | 22,319,148 | 22,319,148 | SNP | C/G | rs71455753 (DbSNP) | |
15 | 22,319,166 | 22,319,166 | SNP | T/G | rs1429505 (DbSNP) | |
15 | 22,319,174 | 22,319,174 | SNP | C/T | rs6602966 (DbSNP) | |
15 | 22,319,253 | 22,319,253 | SNP | A/G | rs6602967 (DbSNP) | |
15 | 22,319,295 | 22,319,295 | SNP | C/T | rs4779264 (DbSNP) | |
15 | 22,319,389 | 22,319,389 | SNP | A/T | rs8025521 (DbSNP) | |
15 | 22,319,410 | 22,319,410 | SNP | A/G | rs8029027 (DbSNP) | |
15 | 22,319,428 | 22,319,428 | SNP | A/G | rs58008868 (DbSNP) | |
15 | 22,319,445 | 22,319,445 | SNP | A/G | rs6602968 (DbSNP) | |
15 | 22,319,455 | 22,319,455 | SNP | C/G | rs58319275 (DbSNP) | |
15 | 22,319,483 | 22,319,483 | SNP | G/A | rs995427 (DbSNP) | |
15 | 22,319,497 | 22,319,497 | SNP | C/G | rs1366875 (DbSNP) | |
15 | 22,319,565 | 22,319,565 | SNP | A/G | rs4779265 (DbSNP) | |
15 | 22,319,581 | 22,319,581 | SNP | C/G | rs28495940 (DbSNP) | |
15 | 22,319,605 | 22,319,605 | SNP | G/T | rs74002726 (DbSNP) | |
15 | 22,319,781 | 22,319,781 | SNP | A/G | rs17157687 (DbSNP) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
15 | 20,003,725 | 23,814,757 | CopyNumber | Variation_3951 (DGV) |
15 | 20,143,651 | 23,690,892 | CopyNumber | Variation_3070 (DGV) |
15 | 20,161,372 | 22,351,239 | CopyNumber | Variation_49466 (DGV) |
15 | 20,161,372 | 22,368,110 | CopyNumber | Variation_49467 (DGV) |
15 | 20,161,372 | 22,449,059 | CopyNumber | Variation_49468 (DGV), Variation_49469 (DGV) |
15 | 20,161,372 | 22,755,185 | CopyNumber | Variation_49470 (DGV) |
15 | 20,161,372 | 23,226,254 | CopyNumber | Variation_49471 (DGV) |
15 | 20,167,086 | 22,588,036 | CopyNumber | Variation_8779 (DGV) |
15 | 20,167,086 | 22,862,959 | CopyNumber | Variation_34576 (DGV) |
15 | 20,167,086 | 22,869,764 | CopyNumber | Variation_8781 (DGV) |
15 | 20,167,086 | 23,222,284 | CopyNumber | Variation_9251 (DGV), Variation_34504 (DGV) |
15 | 20,167,086 | 23,854,707 | CopyNumber | Variation_8784 (DGV) |
15 | 20,167,089 | 22,588,036 | CopyNumber | Variation_9250 (DGV) |
15 | 20,167,089 | 22,869,763 | CopyNumber | Variation_34665 (DGV) |
15 | 20,167,089 | 23,222,284 | CopyNumber | Variation_34608 (DGV) |
15 | 20,171,787 | 22,646,418 | CopyNumber | Variation_31980 (DGV) |
15 | 20,198,198 | 22,591,284 | CopyNumber | Variation_30670 (DGV) |
15 | 20,266,957 | 22,674,466 | CopyNumber | Variation_0318 (DGV) |
15 | 20,397,403 | 22,698,551 | CopyNumber | Variation_7046 (DGV) |
15 | 20,422,586 | 22,588,019 | CopyNumber | Variation_34663 (DGV) |
15 | 20,541,678 | 22,368,898 | CopyNumber | Variation_58702 (DGV) |
15 | 20,610,110 | 22,575,858 | Inversion | Variation_0443 (DGV) |
15 | 20,625,544 | 22,559,977 | Inversion | Variation_0444 (DGV) |
15 | 20,851,594 | 22,588,036 | CopyNumber | Variation_34545 (DGV) |
15 | 20,852,150 | 23,222,284 | CopyNumber | Variation_8785 (DGV) |
15 | 20,879,638 | 22,777,875 | CopyNumber | Variation_9254 (DGV) |
15 | 20,935,075 | 22,777,875 | CopyNumber | Variation_8783 (DGV) |
15 | 21,012,524 | 23,222,284 | CopyNumber | Variation_9256 (DGV) |
15 | 21,054,356 | 22,453,425 | CopyNumber | Variation_76814 (DGV), Variation_87462 (DGV) |
15 | 21,072,035 | 22,588,019 | CopyNumber | Variation_34607 (DGV) |
15 | 21,097,124 | 22,449,059 | CopyNumber | Variation_9742 (DGV) |
15 | 21,200,251 | 22,588,036 | CopyNumber | Variation_8786 (DGV) |
15 | 21,276,422 | 22,453,425 | CopyNumber | Variation_87468 (DGV) |
15 | 21,362,809 | 22,453,425 | CopyNumber | Variation_76815 (DGV) |
15 | 22,262,145 | 22,453,425 | CopyNumber | Variation_76813 (DGV) |
15 | 22,262,185 | 22,336,007 | CopyNumber | Variation_72150 (DGV) |
15 | 22,262,185 | 22,373,349 | CopyNumber | Variation_72167 (DGV) |
15 | 22,262,185 | 22,596,129 | CopyNumber | Variation_72162 (DGV) |
15 | 22,265,649 | 22,591,752 | CopyNumber | Variation_37535 (DGV), Variation_37626 (DGV) |
15 | 22,286,537 | 22,453,425 | CopyNumber | Variation_87461 (DGV) |
15 | 22,287,131 | 22,399,235 | CopyNumber | Variation_59598 (DGV) |
15 | 22,298,201 | 22,343,860 | CopyNumber | Variation_66725 (DGV) |
15 | 22,302,006 | 22,588,022 | CopyNumber | Variation_38952 (DGV) |
15 | 22,304,940 | 22,427,590 | CopyNumber | Variation_72152 (DGV) |
15 | 22,307,069 | 22,474,088 | CopyNumber | Variation_2182 (DGV) |
15 | 22,316,854 | 22,319,882 | Deletion, CopyNumber | #262 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
Accession | Type | Chr | Start | End | Strand | |
---|---|---|---|---|---|---|
OR11K1P.aApr07-unspliced | main_exon | 3UTR | chr15 | 22,030,583 | 22,030,903 | - |
CDS_partial | chr15 | 22,030,903 | 22,030,967 | - |