OR11K2P Olfactory Receptor
| Gene Symbol | OR11K2P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | K |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR14-2, HsOR14.1.2P |
| External Ids | HGNC: 19635 GeneBank: BK004629, NG_004392 |
| Build #39 labels | OR11K2P |
| Chromosomal location | 14:19,733,346-19,734,293 (-) |
| Cluster | 14@20b |
| Synteny | CLIC#32 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11K1P | 90.1% | 313 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11K2 | 80% | 315 |
| Mouse | Or11g2 | 58% | 311 |
| Rat | Or11j4 | 58% | 306 |
| Cow | OR11K2 | 75% | 307 |
| Orang | OR11K2 | 90% | 316 |
| Orang | OR11K2B | 88% | 316 |
| Orang | OR11K2C | 88% | 316 |
| Horse | OR11K6 | 79% | 316 |
| Chimp | OR11K1P | 90% | 313 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DB096700 |
Sequence information
| Nucleotide sequence |
ATGTCCAGCATGGAAACGATTAATTTTGTTAGCTACTTTATCCTCATGGGCTTTCCCTCA AGCCCAGAAATGCAGCTCCTCTACTTTGGTCTCTTCTCATTAGCCTATACTCTCACCCTG ATGGGAAATGCATCCATTGTCTGTGCTGTGTGGTGGGACCAGCACCTTCACACTCCCATG TACACCCTCTTGGGAAATTTCTCTCTCCTGGAAATATGTTATGTTATTACAACTGTTCCT AAACTGCTGGCCAACTTCCTCTCCACAAGCAAGTCCATCTCATTCATGAGTTGTTTTGCA CAGTTCTACTTCTTCTTATCTTTGGGGTATGATGAGGGCTTCTTCCTTTGCATCATGGCC TTTGACAGGTATCTTGCCATCTGCCGCCCTCTACGTTATCCATGCATTATGAATAAGCAA GTATGCACTGGCCTTATCATCTTTGCATGGTCATGTGTCTTTGTAATCTTCCTAATTCTG TTGATTCTCATTTCACAGATATCCTACTGTGGCCCAAATATTATCAACCATTTTGTTTGT GATCCTGTACCATTGGTGATGCTGTCCTGTTCTGCAGACATAATCATCACCTAGCTCATT TACTCCACATTCAATTCTATCTTCATGATTGGCACCTTTCTCTTTATCCTTTGTTCCTAT GCTCTGGTGATTCTGGCTGTAATACAGATGCCTTCAGAGGCTGGCAAACGAAAGGCTTTC TCCACTTGTGCCTCTCATTTGGCAGTTGTCACCTTGTTTTATGGCTCTATCATGGTGATG TATGTTAGTCCTGGATCAGCACACCCAGTAAAAATGCAAAAAATCATTACCTTGTTCTAT TCTGTGATAACACCACTCTGTAATCCTCTAATATATAGTCTCAGGAGCAAAGAGATGAAA GATTCTCTGAGGAAAATCTTCAGGACTGGAAAAGATGTTAATAAAATA |
| Conceptual translation |
MSSMETINFVSYFILMGFPSSPEMQLLYFGLFSLAYTLTLMGNASIVCAVWWDQHLHTPM YTLLGNFSLLEICYVITTVPKLLANFLSTSKSISFMSCFAQFYFFLSLGYDEGFFLCIMA FDRYLAICRPLRYPCIMNKQVCTGLIIFAWSCVFVIFLILLILISQISYCGPNIINHFVC DPVPLVMLSCSADIIITXIYSTFNSIFMIGTFLFILCSYALVILAVIQMPSEAGKRKAF STCASHLAVVTLFYGSIMVMYVSPGSAHPVKMQKIITLFYSVITPLCNPLIYSLRSKEMK DSLRKIFRTGKDVNKI Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 20,201,972 | 20,201,972 | SNP | A/C | rs4391979 (DbSNP) | |
| 14 | 20,201,798 | 20,201,798 | SNP | A/G | rs4353407 (DbSNP) | |
| 14 | 20,202,045 | 20,202,045 | SNP | A/G | rs8006842 (DbSNP) | |
| 14 | 20,202,040 | 20,202,040 | SNP | A/T | rs8011997 (DbSNP) | |
| 14 | 20,201,561 | 20,201,561 | SNP | C/T | rs4497603 (DbSNP) | |
| 14 | 20,202,389 | 20,202,389 | SNP | G/T | rs4641652 (DbSNP) | |
| 14 | 19,733,402 | 19,733,402 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 14 | 19,733,813 | 19,733,813 | SNP | A/C | 1000GP (CEU, CHBJPT) | |
| 14 | 19,733,881 | 19,733,881 | SNP | T/A | 1000GP (CEU, CHBJPT) | |
| 14 | 19,733,886 | 19,733,886 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 14 | 19,734,230 | 19,734,230 | SNP | G/T | 1000GP (CEU, CHBJPT) | |
| 14 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 20,197,616 | 20,399,048 | CopyNumber | Variation_0316 (DGV) |
| 14 | 19,662,531 | 20,556,187 | CopyNumber | Variation_3929 (DGV) |
| 14 | 20,080,166 | 20,271,356 | CopyNumber | Variation_4824 (DGV) |
| 14 | 20,095,109 | 20,231,601 | CopyNumber | Variation_4825 (DGV) |
| 14 | 19,117,183 | 20,424,605 | CopyNumber | Variation_7028 (DGV) |
| 14 | 20,177,234 | 20,424,604 | CopyNumber | Variation_30648 (DGV) |
| 14 | 19,360,239 | 20,424,604 | CopyNumber | Variation_31953 (DGV) |
| 14 | 19,670,757 | 20,331,117 | CopyNumber | Variation_37621 (DGV) |
| 14 | 20,200,183 | 20,423,372 | CopyNumber | Variation_38951 (DGV) |
| 14 | 19,349,922 | 20,424,856 | CopyNumber | Variation_58655 (DGV) |
| 14 | 20,177,210 | 20,424,753 | CopyNumber | Variation_66584 (DGV) |
| 14 | 20,194,500 | 20,255,301 | CopyNumber | Variation_71832 (DGV) |
| 14 | 19,781,170 | 20,424,776 | CopyNumber | Variation_71833 (DGV) |
| 14 | 20,198,061 | 20,307,453 | CopyNumber | Variation_71859 (DGV) |
| 14 | 19,780,325 | 20,202,019 | CopyNumber | Variation_71861 (DGV) |
| 14 | 20,152,622 | 20,419,574 | CopyNumber | Variation_76554 (DGV), Variation_87112 (DGV) |
| 14 | 20,185,336 | 20,310,638 | CopyNumber | Variation_76557 (DGV) |
| 14 | 20,152,622 | 20,212,550 | CopyNumber | Variation_87115 (DGV) |
| 14 | 20,179,862 | 20,261,582 | CopyNumber | Variation_87116 (DGV) |
| 14 | 20,196,206 | 20,245,238 | CopyNumber | Variation_87117 (DGV) |
| 14 | 20,201,654 | 20,343,302 | CopyNumber | Variation_87118 (DGV) |
| 14 | 20,199,505 | 20,202,552 | CopyNumber | #163 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR11K2P.aApr07-unspliced | main_exon | CDS_partial | chr14 | 19,734,094 | 19,734,293 | - |
| 5UTR | chr14 | 19,734,293 | 19,734,346 | - | ||