OR11M1P Olfactory Receptor
| Gene Symbol | OR11M1P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR12.3.8P, ORL3666 |
| External Ids | HGNC: 15333 GeneBank: AF399469, NG_004284 ORDB: ORL3666 |
| Build #39 labels | OR11M1P |
| Chromosomal location | 12:48,627,840-48,628,812 (+) |
| Cluster | 12@49b |
| Synteny | CLIC#30 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11A1 | 46.18% | 301 |
| OR11I1P | 48.11% | 291 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR11I1 | 49% | 298 |
| Mouse | Or11m3 | 76% | 309 |
| Rat | Or11m3 | 77% | 300 |
| Cow | OR11A12 | 45% | 324 |
| Orang | OR11I1P | 47% | 304 |
| Horse | OR11M4P | 77% | 313 |
| Chimp | OR11I1P | 48% | 304 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | 40465_at |
Sequence information
| Nucleotide sequence |
CCTCTCTTCTCTTGGGCCCAGACCTGGAAGAAGAAGCAGTCCAGTGGTGACAGTGGGAAC CAGACCACCTGGCTGATCCTAGTGGGCTTCGGGGAGCTGCAATACCTGGGCTTCCTTCCC TTCACTCTCTTCCTGGCCATCTATGTGGTGACAGTTGGGGGCAATGCCCTCATCATGCTG GCTGTGGCCTCTAGTCGGACACTGCACCCACCAATGTACTTCTTCCTCTGCCACTTCTCC CTGCTGGAGATTGGCTATACCTCCAACGTCATACTATGGCTGTTGCAGAGTTTCTTGGAG GGGAAGGAAGTCATCTCTCTAGTCAGCTGTCTGGCTCAGTTCTACGTGTTTTCCTCGCTG GCTGCAGCTGAGTGCCTCCTGCTATCTGCCGTGTCCTATGACTGTTACTTGGCCATCTGC TGCCCCCTTCACTATCCTGCCCTGATGAGCACCTGGTTTTGTCACTGCCTGGCCGCTGGT GCTTGGTTCAGTGGCTTCTTCTCCTCTGCCTTCACTATGGCCCTGGCAGCACCTCTGTCC TGGCAGCAGGGAGATTGACCACTATTTCTGTGAGTTTGCTCCAGTAGTCAGGCAGTTCTG CGGGGATGTGGGAGTCATGTAGGGAGCTGAAGTCAGCATCTCAGGCTTCCTGACACTGGC CGCCTTCCTACTGATTGTGGCATCCTCTGCCTTCATTGAGGGCTGTACTGCAAATACCCT CAGGCCATGAGAGGCAGAAAGCCTTCTTCACCTGTTCCTCCCACCTCACCGTAGTTGGGG TATTTTATGGCACCCTCATTGTGGTCTATGTGGCCCCAATAGAACACATGTCCCCTTGCT TCTAAAGGTCTTCTCTGTCCTCTACACAGTGTTCACTCCCATGGTCAACTCCATCATCCA CAGCCTCAAGAACCAAGAGGTGAAGGGGGCTCTGCATAGGCTCAGGGGACAGCTCATCCC AGGACACACTCAC |
| Conceptual translation |
PLFSWAQTWKKKQSSGDSGNQTTWLILVGFGELQYLGFLPFTLFLAIYVVTVGGNALIML AVASSRTLHPPMYFFLCHFSLLEIGYTSNVILWLLQSFLEGKEVISLVSCLAQFYVFSSL AAAECLLLSAVSYDCYLAICCPLHYPALMSTWFCHCLAAGAWFSGFFSSAFTMALAAPLS W\REIDHYFCEFAPVVRQFCGDVGVMXAEVSISGFLTLAAFLLIVASSAFIE\VLQI PSGHERQKAFFTCSSHLTVVGVFYGTLIVVYVAPIE/HVPLLLKVFSVLYTVFTPMVNS IIHSLKNQEVKGALHRLRGQLIPGHTH Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 12 | 49,021,713 | 49,021,712 | Ins(1) | -/G | rs34650671 (DbSNP) | |
| 12 | 49,022,402 | 49,022,402 | SNP | A/G | rs7967542 (DbSNP) | |
| 12 | 49,021,953 | 49,021,953 | SNP | C/T | rs74089307 (DbSNP) | |
| 12 | 49,022,108 | 49,022,108 | SNP | G/T | rs7967175 (DbSNP) | |
| 12 | 48,628,106 | 48,628,106 | SNP | C/A | 1000GP (CEU) | |
| 12 | 48,628,115 | 48,628,115 | SNP | A/T | 1000GP (CEU) | |
| 12 | 48,628,325 | 48,628,325 | SNP | G/T | 1000GP (CEU) | |
| 12 | 48,628,619 | 48,628,619 | SNP | G/A | 1000GP (CEU) | |
| 12 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 12 | 49,021,523 | 49,024,595 | CopyNumber | #87 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.