OR11P1P Olfactory Receptor
| Gene Symbol | OR11P1P1 (View this gene in GeneCards) |
| Family | 11 |
| Subfamily | P |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 19636 GeneBank: NG_004302 |
| Build #39 labels | OR11P1P |
| Chromosomal location | 14:20,183,925-20,184,298 (-) |
| Cluster | 14@20b |
| Synteny | CLIC#32 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR11H7P | 44.66% | 103 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Mouse | Or11h23 | 47% | 101 |
| Horse | OR11F1P | 59% | 115 |
| Chimp | OR11P2P | 79% | 119 |
Sequence information
| Nucleotide sequence |
CTGACAGCCTTTCCCTACACCGATGCCACATCTCAGAACATGCACTATGTAAATTTTCTT ATTATCATTCTCAGTATTTTGTACATCCCTGGACCATATACGTTGATCCTAAGAGCTATG CTTCAGCTGCTTTCAGCAGCTAGCCATCAAAATGCCTTTTCTATCCGTGGGTCTCACTTA ATAGTGGTGTCTCTGTTCTGTGAAACCATATGATGATGTGTGTGAATCTCATATCTGACC ATTTAGTATAAATGAAGATGACAAATCACAATATCATAATGATATCCTCCATAAAGACTC TAGTTTTAAACTTTGTCAATTACACCTTACTCAATATGAACTTAAAACCTATCTTCAGTT TTTTTTTTATGGAA |
| Conceptual translation |
LTAFPYTDATSQNMHYVNFLIIILSILYIPGPYTLILRAMLQLLSAASHQNAFSIRGSHL IVVSLFC/NHMMMCVNLISDHLVXKMTNHNIIMISSIKTLVLNFVNYTLLNMNLKPIF SFFFME Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 14 | 20,652,446 | 20,652,446 | SNP | A/C | rs4981806 (DbSNP) | |
| 14 | 20,652,144 | 20,652,144 | SNP | A/G | rs4981803 (DbSNP) | |
| 14 | 20,652,439 | 20,652,439 | SNP | C/T | rs4981804 (DbSNP) | |
| 14 | 20,183,985 | 20,183,985 | SNP | A/G | 1000GP (CEU) | |
| 14 | 20,184,280 | 20,184,280 | SNP | T/C | 1000GP (CEU) | |
| 14 | 20,184,287 | 20,184,287 | SNP | A/C | 1000GP (CEU) | |
| 14 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 14 | 20,203,125 | 20,716,841 | CopyNumber | Variation_8765 (DGV) |
| 14 | 20,203,125 | 20,655,466 | CopyNumber | Variation_34656 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.