OR13K1P Olfactory Receptor
| Gene Symbol | OR13K1P1 (View this gene in GeneCards) |
| Family | 13 |
| Subfamily | K |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsORX.1.6P, ORL4073 |
| External Ids | HGNC: 14721 GeneBank: NG_004632 ORDB: ORL4073 |
| Build #39 labels | OR13K1P |
| Chromosomal location | X:131,562,729-131,563,812 (+) |
| Cluster | X@131b |
| Synteny | CLIC#48 |
| Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2AF1P | 51.38% | 325 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR13K7P | 68% | 328 |
| Mouse | Or13d1 | 45% | 330 |
| Rat | Or13d1 | 45% | 330 |
| Cow | OR13K8P | 64% | 335 |
| Orang | OR2AF1P | 50% | 335 |
| Horse | OR13K9P | 64% | 335 |
| Chimp | OR13K1 | 93% | 303 |
Sequence information
| Nucleotide sequence |
ATGGATATTCTGGTTATTGATAATGGCAGTGAAGTGACAGAGTTCATCCTGGTGGGTTTG TACAACCATCCAAAATTTCAGATTGCCTTTTATCGCACCATGGTAGTGGTCTACCTGATC ACATTTGTTGGTAGCAGTCTCATTATTGTTGTGGTTAAAGTTGATGGGTGGCTTCACACT CCTATGTGTTTTTTCCTAAGCAACCTGTCCTTCCTTGATATCTGCTACTCCAGCAATTCA GTACCTTTTTTGTTGTTCAATGGCTTAAGAGACTACCCCACCATTTCCTATAACAGCTGT TATGCCCAGATGACCAGTGCTTTTTTTCTGGGGATGACAGGGTGTCTTCTCCTTGCTGTC ATGGCTTATGAGAGATTTGTTGTGATCTCCAATCCCCTGCGCTACATCATCATTATGAAC AATAAGGTCTGCATACAGTTGGCCATGGTGACCTGGGCCAGTGCCTTCCTTATGTCATTA ATACAATAATTGCAATAATACATTGCAATAATACATTAATTGCAATGATTGCATTGCAAT TCCTGCCCATTTTTGTGGACACAATGTCATCAACCATTTTACCTGTGAGGTGCAGGAATT GTTGAAGCTTGTCTGCTCAGACATCCCAGGCAGCCTCATCCTCGGTCTAGTCATCGGCAT ATTCACCTTGTCCCTGCCCTTCACCTTGCCCCTGCCCTTCACCTTCATCCTCTTCGCCTA TGCTCACATTGTGGTTGCTGTGCTGAGGATCAACTCTGCAGAGGCCAGACTCAAAGCTTT CTCCACCTGTGGATCCCATCTGACTGTGATCATCATATTTTATGGGACAGCCACCTACAT GTACTTGAAACCTCAGTCAAGGGAATCCCAAGATGAGGGTAAAGTCATCTCTGTATTTTT TTTGAAAGTAGAGAAGCAACATCAAAATGATAGCATCTCTGTATTTTATGGTGTTGTGAC CCCTATGTTGAACCCCCTCATTTACACCTTGAGAGACAAGGATGCGAAAA |
| Conceptual translation |
MDILVIDNGSEVTEFILVGLYNHPKFQIAFYRTMVVVYLITFVGSSLIIVVVKVDGWLHT PMCFFLSNLSFLDICYSSNSVPFLLFNGLRDYPTISYNSCYAQMTSAFFLGMTGCLLLAV MAYERFVVISNPLRYIIIMNNKVCIQLAMVTWASAFLMSLIQXQXIAIIHX/MI/ IAIPAHFCGHNVINHFTCEVQELLKLVCSDIPGSLILGLVIGIFTLSLPFTLPLPFTFIL FAYAHIVVAVLRINSAEARLKAFSTCGSHLTVIIIFYGTATYMYLKPQSRESQDEGKVIS VFFLEKQHQNDSISVFYGVVTPMLNPLIYTLRDKDAK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| X | 130,697,489 | 130,697,489 | SNP | C/G | rs61742427 (DbSNP) | |
| X | 130,697,692 | 130,697,692 | SNP | G/A | rs2874451 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 147 (Hasin) | |||
| X | 130,696,603 | 130,699,786 | Deletion | #317 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.