OR13K1P Olfactory Receptor
Gene Symbol | OR13K1P1 (View this gene in GeneCards) |
Family | 13 |
Subfamily | K |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | HsORX.1.6P, ORL4073 |
External Ids | HGNC: 14721 GeneBank: NG_004632 ORDB: ORL4073 |
Build #39 labels | OR13K1P |
Chromosomal location | X:131,562,729-131,563,812 (+) |
Cluster | X@131b |
Synteny | CLIC#48 |
Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR2AF1P | 51.38% | 325 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR13K7P | 68% | 328 |
Mouse | Or13d1 | 45% | 330 |
Rat | Or13d1 | 45% | 330 |
Cow | OR13K8P | 64% | 335 |
Orang | OR2AF1P | 50% | 335 |
Horse | OR13K9P | 64% | 335 |
Chimp | OR13K1 | 93% | 303 |
Sequence information
Nucleotide sequence |
ATGGATATTCTGGTTATTGATAATGGCAGTGAAGTGACAGAGTTCATCCTGGTGGGTTTG TACAACCATCCAAAATTTCAGATTGCCTTTTATCGCACCATGGTAGTGGTCTACCTGATC ACATTTGTTGGTAGCAGTCTCATTATTGTTGTGGTTAAAGTTGATGGGTGGCTTCACACT CCTATGTGTTTTTTCCTAAGCAACCTGTCCTTCCTTGATATCTGCTACTCCAGCAATTCA GTACCTTTTTTGTTGTTCAATGGCTTAAGAGACTACCCCACCATTTCCTATAACAGCTGT TATGCCCAGATGACCAGTGCTTTTTTTCTGGGGATGACAGGGTGTCTTCTCCTTGCTGTC ATGGCTTATGAGAGATTTGTTGTGATCTCCAATCCCCTGCGCTACATCATCATTATGAAC AATAAGGTCTGCATACAGTTGGCCATGGTGACCTGGGCCAGTGCCTTCCTTATGTCATTA ATACAATAATTGCAATAATACATTGCAATAATACATTAATTGCAATGATTGCATTGCAAT TCCTGCCCATTTTTGTGGACACAATGTCATCAACCATTTTACCTGTGAGGTGCAGGAATT GTTGAAGCTTGTCTGCTCAGACATCCCAGGCAGCCTCATCCTCGGTCTAGTCATCGGCAT ATTCACCTTGTCCCTGCCCTTCACCTTGCCCCTGCCCTTCACCTTCATCCTCTTCGCCTA TGCTCACATTGTGGTTGCTGTGCTGAGGATCAACTCTGCAGAGGCCAGACTCAAAGCTTT CTCCACCTGTGGATCCCATCTGACTGTGATCATCATATTTTATGGGACAGCCACCTACAT GTACTTGAAACCTCAGTCAAGGGAATCCCAAGATGAGGGTAAAGTCATCTCTGTATTTTT TTTGAAAGTAGAGAAGCAACATCAAAATGATAGCATCTCTGTATTTTATGGTGTTGTGAC CCCTATGTTGAACCCCCTCATTTACACCTTGAGAGACAAGGATGCGAAAA |
Conceptual translation |
MDILVIDNGSEVTEFILVGLYNHPKFQIAFYRTMVVVYLITFVGSSLIIVVVKVDGWLHT PMCFFLSNLSFLDICYSSNSVPFLLFNGLRDYPTISYNSCYAQMTSAFFLGMTGCLLLAV MAYERFVVISNPLRYIIIMNNKVCIQLAMVTWASAFLMSLIQXQXIAIIHX/MI/ IAIPAHFCGHNVINHFTCEVQELLKLVCSDIPGSLILGLVIGIFTLSLPFTLPLPFTFIL FAYAHIVVAVLRINSAEARLKAFSTCGSHLTVIIIFYGTATYMYLKPQSRESQDEGKVIS VFFLEKQHQNDSISVFYGVVTPMLNPLIYTLRDKDAK Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
X | 130,697,489 | 130,697,489 | SNP | C/G | rs61742427 (DbSNP) | |
X | 130,697,692 | 130,697,692 | SNP | G/A | rs2874451 (DbSNP) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
CopyNumber | 147 (Hasin) | |||
X | 130,696,603 | 130,699,786 | Deletion | #317 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.