OR13Z2P Olfactory Receptor
| Gene Symbol | OR13Z2P1 (View this gene in GeneCards) |
| Family | 13 |
| Subfamily | Z |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR1.3.2P |
| External Ids | HGNC: 31241 GeneBank: NG_004406 |
| Build #39 labels | |
| Chromosomal location | 1:147,445,578-147,446,133 (+) |
| Cluster | 1@147 |
| Synteny | CLIC#3 |
| Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR13Z1P | 69.61% | 181 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
CTTGAAATAAGCAATCAAACATATGTCACCAAATTCATCTTTTGGGTATTTTCCAACCAC TCCAACCTACAAGGCTTGTTCTTCCTGGTCTTTCTGGTCATTTACCTGACACTCTGGGAG AATATGCTCATAATGGTGGCCACCAGATTTAGCCCTCCACATTCCACTGTATTATCTCCT CAGTAACCTGAGCTTCCTGGATATCTGCTACATGTCTACCACCATCCTGGTCATGCTGGT GAACTTCTTCCAGGAGAAGAAGATCATCTCCTACGAAGCCTGCCTTTCCCAGATCTTTTT CCTTGCGTCATGAGCCAGCACTGAGGGTGTCTTGCTGGCTGCCATGGCTTATGACCACTG TGTGGCCATTTGCCACCCTCTTCAATATAAGCTCCTAATGAGTGAAAAGTTCTGTTTGGT GACTGGGTTTTGGATGTGTGGGCTGGTCAATTCTGGGACACACACAGCACTGACAGCCAC ATTCATTCTGTGTAAACCCAACCCAATCAGCCACTTTCTCTGTGTCATCCCATTTTAATT ATCCAGTCCCAAAAAA |
| Conceptual translation |
LEISNQTYVTKFIFWVFSNHSNLQGLFFLVFLVIYLTLWENMLIMVAT\LALHIPLYYL LSNLSFLDICYMSTTILVMLVNFFQEKKIISYEACLSQIFFLASXSTEGVLLAAMAYDH CVAICHPLQYKLLMSEKFCLVTGFWMCGLVNSGTHTALTATFILCKPNPISHFLCVIPFXbr/>LSS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI, YRI) | |
| 1 | 146,917,381 | 146,917,381 | SNP | A/G | rs74123855 (DbSNP) | |
| 1 | 146,917,385 | 146,917,385 | SNP | C/T | rs6688033 (DbSNP) | |
| 1 | 146,917,532 | 146,917,532 | SNP | C/T | rs6688154 (DbSNP) | |
| 1 | 146,917,569 | 146,917,569 | SNP | C/G | rs57748617 (DbSNP) | |
| 1 | 146,917,589 | 146,917,589 | SNP | C/G | rs6688244 (DbSNP) | |
| 1 | 146,917,617 | 146,917,617 | SNP | A/G | rs6678706 (DbSNP) | |
| 1 | 147,445,652 | 147,445,652 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 1 | 147,445,856 | 147,445,856 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 1 | 147,445,884 | 147,445,884 | SNP | G/A | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 1 | 145,831,974 | 147,391,604 | Inversion | Variation_29494 (DGV) |
| 1 | 146,884,994 | 147,083,866 | CopyNumber | Variation_4253 (DGV) |
| 1 | 146,893,554 | 146,927,361 | CopyNumber | Variation_34580 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.