OR14L1P Olfactory Receptor
| Gene Symbol | OR14L1P1 (View this gene in GeneCards) |
| Family | 14 |
| Subfamily | L |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR1.5.6 |
| External Ids | HGNC: 15023 |
| Build #39 labels | OR5AV1 |
| Chromosomal location | 1:247,619,681-247,620,559 (+) |
| Cluster | 1@248 |
| Synteny | CLIC#0 |
| Remarks | Coding for partial protein. |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR14A16 | 52.61% | 287 |
| OR14A2 | 53.63% | 289 |
| OR14J1 | 51.9% | 289 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR14J1B | 54% | 289 |
| Mouse | Or14p1 | 53% | 292 |
| Rat | Or14p1 | 53% | 289 |
| Cow | OR14J12 | 58% | 289 |
| Orang | OR14A263 | 56% | 289 |
| Horse | OR14J13 | 54% | 289 |
| Chimp | OR14L1 | 99% | 293 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h03757_at |
Sequence information
| Nucleotide sequence |
ATGGGATTTTCGAATTCCTGGGATATTCAGATTGTACATGCTGCTCTATTCTTCCTAGTT TACCTGGCAGCTGTCATAGGAAATCTCCTAATCATCATACTTACCACTCTGGATGTTCAC CTCCAAACCCCAATGTATTTCTTTTTGAGAAACTTGTCTTTCTTAGATTTTTGTTACATC TCTGTCACAATTCCAAAATCTATTGTTAGTTCCTTGACTCATGATACTTCCATTTCTTTC TTTGGGTGTGCTCTGCAAGCCTTCTTTTTCATGGACTTGGCAACTACGGAGGTAGCCATC CTTACAGTGATGTCCTATGACCGCTATATGGCCATCTGCCGGCCTTTACATTATGAGGTC ATCATAAACCAAGGTGTCTGTCTGAGGATGATGGCCATGTCGTGGCTCAGTGGGGTGATC TGTGGATTCATGCATGTGATAGCAACATTCTCATTACCATTCTGTGGGCGCAATAGAATA CGTCAATTTTTCTGTAATATTCCACAGCTCCTAAGCCTCTTAGACCCCAAAGTAATTACC ATTGAGATTGGAGTCATGGTTTTTGGTACAAGTCTTGTGATAATCTCCTTTGTTGTAATT ACTCTCTCCTACATGTACATTTTTTCTGTCATCATGAGGATTCCTTCTAAGGAGGGTAGA TCAAAAACATTTTCTACCTGCATTCCACATCTTGTGGTTGTAACACTCTTTATGATATCT GGCAGCATTGCCTATGTGAAGCCAATTTCAAATTCTCCCCCCGTTCTGGATGTTTTCCTG TCTGCGTTCTACACAGTCGTGCCCCCGACCCTGAACCCCGTCATCTATAGTCTGAGGAAT AGGGACATGAAGGCAGCCCTGAGAAGGCAGTGTGGTCCC |
| Conceptual translation |
MGFSNSWDIQIVHAALFFLVYLAAVIGNLLIIILTTLDVHLQTPMYFFLRNLSFLDFCYI SVTIPKSIVSSLTHDTSISFFGCALQAFFFMDLATTEVAILTVMSYDRYMAICRPLHYEV IINQGVCLRMMAMSWLSGVICGFMHVIATFSLPFCGRNRIRQFFCNIPQLLSLLDPKVIT IEIGVMVFGTSLVIISFVVITLSYMYIFSVIMRIPSKEGRSKTFSTCIPHLVVVTLFMIS GSIAYVKPISNSPPVLDVFLSAFYTVVPPTLNPVIYSLRNRDMKAALRRQCGP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 100 | -100 | SNP | C/G | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) | |
| 1 | 247,620,003 | 247,620,003 | SNP | G/A | 1000GP (CHBJPT) | |
| 1 | 247,620,187 | 247,620,187 | SNP | G/A | 1000GP (CEU) | |
| 1 | 247,783,332 | 247,783,332 | SNP | A/G | rs60516960 (DbSNP) | |
| 1 | 247,783,451 | 247,783,451 | SNP | C/T | rs61706274 (DbSNP) | |
| 1 | 247,783,489 | 247,783,489 | SNP | A/G | rs41268351 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 1 | 247,074,430 | 248,328,835 | CopyNumber | Variation_6816 (DGV) |
| 1 | 247,714,585 | 248,277,146 | CopyNumber | Variation_3339 (DGV) |
| 1 | 247,753,207 | 248,376,070 | CopyNumber | Variation_8353 (DGV) |
| 1 | 247,753,334 | 248,322,316 | CopyNumber | Variation_2358 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.