OR1D4 Olfactory Receptor
| Gene Symbol | OR1D41 (View this gene in GeneCards) |
| Family | 1 |
| Subfamily | D |
| Pseudogene | No |
| CORP pseudogene probability score | |
| Aliases | OR17-30, HsOR17.1.8P, ORL33, ORL1017 |
| External Ids | HGNC: 8185 ORDB: ORL33, ORL1017 |
| Build #39 labels | OR1D4 |
| Chromosomal location | 17:3,240,676-3,241,611 (+) |
| Cluster | 17@3b |
| Synteny | CLIC#39 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR1D5 | 98.4% | 312 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR1D3P | 81% | 311 |
| Mouse | Or1d2 | 80% | 310 |
| Rat | Or1d2 | 79% | 310 |
| Cow | OR1D3B | 80% | 311 |
| Cow | OR1D3 | 81% | 302 |
| Orang | OR1D5 | 88% | 312 |
| Horse | OR1D3 | 81% | 311 |
| Chimp | OR1D4B | 95% | 312 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | BC122528 |
Sequence information
| Nucleotide sequence |
ATGGATGGAGATAACCAGAGTGAGAACTCACAGTTCCTTCTCCTGGGGATCTCAGAGAGT CCTGAGCAGCAGCAGATCCTGTTTTGGATGTTCCTGTCCATGTACCTGGTCACGGTGCTG GGAAATGTGCTCATCATCCTGGCCATCAGCTCTGATTCCCACCTGCACACCCCCATGTAC TTCTTCCTGGCCAACCTCTCCTTCACTGACCTCTTCTTTGTCACCAACACAATCCCCAAG ATGCTGGTGAACTTCCAGTCCCAGAACAAAGCCATCTCCTATGCAGGGTGTCTGACACAG CTCTACTTCCTGGTCTCCTTGGTGACCCTGGACAACCTCATCCTGGCCGTGATGGCGTAT GATCGCTATGTGGCCATCTGCTGCCCCCTCCACTATGTCACAGCCATGAGCCCTGGGCTC TGTGTCTTGCTCCTCTCCTTGTGTTGGGGGCTGTCTGTTCTCTATGGCCTCCTCCTCACC TTCCTCCTGACCAGGGTGACCTTCTGTGGGCCTTGAGAGATCCACTACCTCTTCTGTGAC ATGTACATCCTGCTGTGGCTGGCATGTTCCAACACCCACATCATTCACACAGTGTTGATT GCCACTGGCTGCTTCATCTTCCTCACCCCCTTAGGGTTCATGACCACATCCTATGTACGT ATTGTCAGAACCATCCTTCAAATGCCCTCAGCCTCTAAGAAATACAAAACCTTCTCTACC TGTGCCTCCCATTTGGGTGTGGTCTCCCTCTTTTATGGGATGCTTGCTATGGTGTACCTG CAGCCCCTCCATACCTACTCCATGAAGGACTCAGTAGCCACAGTGATGTATGCTGTGCTG ACACCTATGATGAACCCTTTCATCTACAGGCTGAGGAACAAAGACATGCATGGGGCTCCG GGAAGAGTCCTATGGAGACCCTTTCAGAGGCCTAAA |
| Conceptual translation |
MDGDNQSENSQFLLLGISESPEQQQILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMY FFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLYFLVSLVTLDNLILAVMAY DRYVAICCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLLTRVTFCGPXIHYLFCD MYILLWLACSNTHIIHTVLIATGCFIFLTPLGFMTTSYVRIVRTILQMPSASKKYKTFST CASHLGVVSLFYGMLAMVYLQPLHTYSMKDSVATVMYAVLTPMMNPFIYRLRNKDMHGAP GRVLWRPFQRPK Protein domains and features |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 17 | 3,018,447 | 3,159,865 | CopyNumber | Variation_2217 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| A242T | % Freq | CORP | |
|---|---|---|---|
| 1 | A | 99.16 | 1.200 |
| 2 | T | 0.84 | 1.200 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| LOC653166.aApr07-unspliced | main_exon | 5UTR | chr17 | 3,240,622 | 3,240,676 | + |
| CDS | chr17 | 3,240,676 | 3,241,611 | + | ||
| 3UTR | chr17 | 3,241,611 | 3,241,614 | + | ||