OR1D5 Olfactory Receptor
| Gene Symbol | OR1D51 (View this gene in GeneCards) |
| Family | 1 |
| Subfamily | D |
| Pseudogene | No |
| CORP pseudogene probability score | |
| Aliases | OR17-30, OR17-31, OR17-2, HsOR17.1.1, ORL511, ORL459 |
| External Ids | HGNC: 8186 GeneBank: AF087923, AF399533, AF399534, BK004245, HSU04681, NM_014566 ORDB: ORL511, ORL459 |
| Build #39 labels | |
| Chromosomal location | 17:3,062,672-3,063,607 (-) |
| Cluster | 17@3b |
| Synteny | CLIC#39 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR1D4 | 98.4% | 312 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR1D3P | 82% | 311 |
| Mouse | Or1d2 | 81% | 310 |
| Rat | Or1d2 | 80% | 310 |
| Cow | OR1D3B | 79% | 311 |
| Cow | OR1D3 | 81% | 302 |
| Orang | OR1D3C | 85% | 310 |
| Orang | OR1D3 | 84% | 311 |
| Horse | OR1D3 | 81% | 311 |
| Chimp | OR1D4 | 97% | 312 |
| Chimp | OR1D4B | 95% | 312 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB529301 |
Sequence information
| Nucleotide sequence |
ATGGATGGAGATAACCAGAGTGAGAACTCACAGTTCCTTCTCCTGGGGATCTCAGAGAGT CCTGAGCAGCAGCGGATCCTGTTTTGGATGTTCCTGTCCATGTACCTGGTCACGGTGCTG GGAAATGTGCTCATCATCCTGGCCATCAGCTCTGATTCCCACCTGCACACCCCCATGTAC TTCTTCCTGGCCAACCTCTCCTTCACTGACCTCTTCTTTGTCACCAACACAATCCCCAAG ATGCTGGTGAACTTCCAGTCCCAGAACAAAGCCATCTCCTATGCAGGGTGTCTGACACAG CTCTACTTCCTGGTCTCCTTGGTGACCCTGGACAACCTCATCCTGGCCGTGATGGCGTAT GATCGCTATGTGGCCACCTGCTGCCCCCTCCACTATGTCACAGCCATGAGCCCTGGGCTC TGTGTCTTGCTCCTCTCCTTGTGTTGGGGGCTGTCTGTTCTCTATGGCCTCCTCCTCACC TTCCTCCTGACCAGGGTGACCTTCTGTGGGCCTCGAGAGATCCACTACCTCTTCTGTGAC ATGTACATCCTGCTGTGGCTGGCATGTTCCAACACCCACATCATTCACACAGCGTTGATT GCCACTGGCTGCTTCATCTTCCTCACCCCCTTAGGGTTCATGACCACATCCTATGTACGT ATTGTCAGAACCATCCTTCAAATGCCCTCGGCCTCTAAGAAATACAAAACCTTCTCTACC TGTGCCTCCCATTTGGGTGTGGTCTCCCTCTTTTATGGGACGCTTGCTATGGTGTACCTG CAGCCCCTCCATACCTACTCCATGAAGGACTCAGTAGCCACAGTGATGTATGCTGTGCTG ACACCTATGATGAACCCTTTCATCTACAGGCTGAGGAACAAAGACATGCATGGGGCTCCG GGAAGAGTCCTATGGAGACCCTTTCAGAGGCCTAAA |
| Conceptual translation |
MDGDNQSENSQFLLLGISESPEQQRILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMY FFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLYFLVSLVTLDNLILAVMAY DRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLLTRVTFCGPREIHYLFCD MYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIVRTILQMPSASKKYKTFST CASHLGVVSLFYGTLAMVYLQPLHTYSMKDSVATVMYAVLTPMMNPFIYRLRNKDMHGAP GRVLWRPFQRPK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 17 | 100 | -100 | SYN | C/T | A/A | 1000GP (YRI) |
| 17 | 2,966,173 | 2,966,173 | SYN | C/G | S/S | rs61752193 (DbSNP) |
| 17 | 2,966,191 | 2,966,191 | SYN | G/A | T/T | rs61752194 (DbSNP) |
| 17 | 2,966,273 | 2,966,273 | NS | A/G | L/P | rs2676567 (DbSNP) |
| 17 | 2,966,308 | 2,966,308 | SYN | T/C | A/A | rs2855605 (DbSNP) |
| 17 | 3,063,014 | 3,063,014 | SYN | C/T | A/A | 1000GP (CEU) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR1D4.aApr07-unspliced | main_exon | 3UTR | chr17 | 3,062,669 | 3,062,672 | - |
| CDS | chr17 | 3,062,672 | 3,063,607 | - | ||
| 5UTR | chr17 | 3,063,607 | 3,063,661 | - | ||