OR1H1P Olfactory Receptor
| Gene Symbol | OR1H1P1 (View this gene in GeneCards) |
| Family | 1 |
| Subfamily | H |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR9-20, OST26, HsOR9.6.7P, ORL325 |
| External Ids | HGNC: 8206 GeneBank: AF399372, BK004713, NG_004138 ORDB: ORL325 |
| Build #39 labels | OR1H1P |
| Chromosomal location | 9:122,607,864-122,608,797 (+) |
| Cluster | 9@125 |
| Synteny | CLIC#21 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR1E1 | 57.43% | 303 |
| OR1F1 | 56.03% | 307 |
| OR1N1 | 57.48% | 301 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR1AB2 | 61% | 309 |
| Mouse | Or1p1 | 57% | 313 |
| Rat | Or1f19e | 61% | 309 |
| Cow | OR1H1 | 86% | 306 |
| Orang | OR1N17P | 58% | 306 |
| Horse | OR1H1 | 85% | 310 |
| Chimp | OR1H1 | 96% | 311 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h10672_at |
Sequence information
| Nucleotide sequence |
ATGGACAGAAGAAACCAGACCTGCATCTATGAATTTCTTCTCATGGGCTTCTCTGAACAC CAGGAGCAGCAGGCTCTTTTGTTTGGGCTTTTCCTGGTCATGTACTTGGTCACTGTGTTG GAGAACCTGCTAATCATCCTGGCCATTGGCTCTGACCTGCACCTCCACACCCCCCATGTA CCTCTTCCTGTCCAACCTGTCCTTTTTGGATATTGGCTTTATCTCTACAATAATTCCCAA TATGCTAGATCATATTAGCTCAGGAATTAAGCTGATTTCTTATGGGGAGTGTCTGACACA ACTCTATTTCTCTGGCCTATTTGCAGATCTGGACAACAACTTTCTCCTGGCTGTGATGGC CCTTGACCGCTATGTGGCCATCAGCCATCCTCTCCATTATGCCCTAACCATGAACTCCCA ACGCTGTGTCCTGTTGGTGGCTGTGTCATGGGTGATCACTATTTTACATGCCCTAGTGCA TACCCTCCTAGTGACCAGGCTTTCCTTCTGTGGTCCAAATATTATCCCTCACTTCTTCTG TGATCTGGTCCCACTCCTGAAGCTGGCCTGCTCCAGTACTTGTGTCAATGATCTGGTGCT CATCCTTGTGGCAGGAACACTGCTGATTGCGCCCTTTGTCTGCATCCTTATGTCCTACTT TTACATTGCATTGGCCATCCTGAGAATTGATTCCCCAAGGGGTAAGCAAAGGGCCTTCTC CAGCTGCACTTCCCACCTCTCTGTAGTCTCTCTGTTCTATAGCACAGCTATCGGTGTCTA TTTATGTCCTCCATCATCCCACTCAGATGGAAAGGACAGAGTCTTCTCAGTCATGTACAC GGTGGTGACTCCCATGTTGAACCCCTTCATCTACAGCCTGAGGAACAGGGATATGAAGGG GGCACTGGGAAAACTGCTTGGAATAAAAACATCC |
| Conceptual translation |
MDRRNQTCIYEFLLMGFSEHQEQQALLFGLFLVMYLVTVLENLLIILAIGSDLHLHT\M YLFLSNLSFLDIGFISTIIPNMLDHISSGIKLISYGECLTQLYFSGLFADLDNNFLLAVM ALDRYVAISHPLHYALTMNSQRCVLLVAVSWVITILHALVHTLLVTRLSFCGPNIIPHFF CDLVPLLKLACSSTCVNDLVLILVAGTLLIAPFVCILMSYFYIALAILRIDSPRGKQRAF SSCTSHLSVVSLFYSTAIGVYLCPPSSHSDGKDRVFSVMYTVVTPMLNPFIYSLRNRDMK GALGKLLGIKTS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 9 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI) | |
| 9 | 122,608,104 | 122,608,104 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 9 | 122,608,122 | 122,608,122 | SNP | C/A | 1000GP (CEU) | |
| 9 | 125,370,337 | 125,370,337 | rescued_Del(-2) | -/A | rs72262850 (DbSNP) | |
| 9 | 125,370,383 | 125,370,383 | SNP | T/G | rs913855 (DbSNP) | |
| 9 | 125,370,401 | 125,370,401 | SNP | A/C | rs71511535 (DbSNP) | |
| 9 | 125,370,565 | 125,370,565 | SNP | A/G | rs60594368 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.