OR1H1P Olfactory Receptor
Gene Symbol | OR1H1P1 (View this gene in GeneCards) |
Family | 1 |
Subfamily | H |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | OR9-20, OST26, HsOR9.6.7P, ORL325 |
External Ids | HGNC: 8206 GeneBank: AF399372, BK004713, NG_004138 ORDB: ORL325 |
Build #39 labels | OR1H1P |
Chromosomal location | 9:122,607,864-122,608,797 (+) |
Cluster | 9@125 |
Synteny | CLIC#21 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR1E1 | 57.43% | 303 |
OR1F1 | 56.03% | 307 |
OR1N1 | 57.48% | 301 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR1AB2 | 61% | 309 |
Mouse | Or1p1 | 57% | 313 |
Rat | Or1f19e | 61% | 309 |
Cow | OR1H1 | 86% | 306 |
Orang | OR1N17P | 58% | 306 |
Horse | OR1H1 | 85% | 310 |
Chimp | OR1H1 | 96% | 311 |
Expression evidences
Source | Accession |
---|---|
GNF Atlas2 | gnf1h10672_at |
Sequence information
Nucleotide sequence |
ATGGACAGAAGAAACCAGACCTGCATCTATGAATTTCTTCTCATGGGCTTCTCTGAACAC CAGGAGCAGCAGGCTCTTTTGTTTGGGCTTTTCCTGGTCATGTACTTGGTCACTGTGTTG GAGAACCTGCTAATCATCCTGGCCATTGGCTCTGACCTGCACCTCCACACCCCCCATGTA CCTCTTCCTGTCCAACCTGTCCTTTTTGGATATTGGCTTTATCTCTACAATAATTCCCAA TATGCTAGATCATATTAGCTCAGGAATTAAGCTGATTTCTTATGGGGAGTGTCTGACACA ACTCTATTTCTCTGGCCTATTTGCAGATCTGGACAACAACTTTCTCCTGGCTGTGATGGC CCTTGACCGCTATGTGGCCATCAGCCATCCTCTCCATTATGCCCTAACCATGAACTCCCA ACGCTGTGTCCTGTTGGTGGCTGTGTCATGGGTGATCACTATTTTACATGCCCTAGTGCA TACCCTCCTAGTGACCAGGCTTTCCTTCTGTGGTCCAAATATTATCCCTCACTTCTTCTG TGATCTGGTCCCACTCCTGAAGCTGGCCTGCTCCAGTACTTGTGTCAATGATCTGGTGCT CATCCTTGTGGCAGGAACACTGCTGATTGCGCCCTTTGTCTGCATCCTTATGTCCTACTT TTACATTGCATTGGCCATCCTGAGAATTGATTCCCCAAGGGGTAAGCAAAGGGCCTTCTC CAGCTGCACTTCCCACCTCTCTGTAGTCTCTCTGTTCTATAGCACAGCTATCGGTGTCTA TTTATGTCCTCCATCATCCCACTCAGATGGAAAGGACAGAGTCTTCTCAGTCATGTACAC GGTGGTGACTCCCATGTTGAACCCCTTCATCTACAGCCTGAGGAACAGGGATATGAAGGG GGCACTGGGAAAACTGCTTGGAATAAAAACATCC |
Conceptual translation |
MDRRNQTCIYEFLLMGFSEHQEQQALLFGLFLVMYLVTVLENLLIILAIGSDLHLHT\M YLFLSNLSFLDIGFISTIIPNMLDHISSGIKLISYGECLTQLYFSGLFADLDNNFLLAVM ALDRYVAISHPLHYALTMNSQRCVLLVAVSWVITILHALVHTLLVTRLSFCGPNIIPHFF CDLVPLLKLACSSTCVNDLVLILVAGTLLIAPFVCILMSYFYIALAILRIDSPRGKQRAF SSCTSHLSVVSLFYSTAIGVYLCPPSSHSDGKDRVFSVMYTVVTPMLNPFIYSLRNRDMK GALGKLLGIKTS Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
9 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI, YRI) | |
9 | 122,608,104 | 122,608,104 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
9 | 122,608,122 | 122,608,122 | SNP | C/A | 1000GP (CEU) | |
9 | 125,370,337 | 125,370,337 | rescued_Del(-2) | -/A | rs72262850 (DbSNP) | |
9 | 125,370,383 | 125,370,383 | SNP | T/G | rs913855 (DbSNP) | |
9 | 125,370,401 | 125,370,401 | SNP | A/C | rs71511535 (DbSNP) | |
9 | 125,370,565 | 125,370,565 | SNP | A/G | rs60594368 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.