OR1M4P Olfactory Receptor
| Gene Symbol | OR1M4P1 (View this gene in GeneCards) |
| Family | 1 |
| Subfamily | M |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR19.2.2P |
| External Ids | HGNC: 31244 GeneBank: NG_004407 |
| Build #39 labels | |
| Chromosomal location | 19:9,082,936-9,083,398 (-) |
| Cluster | 19@9b |
| Synteny | CLIC#42 |
| Remarks | Disrupted by LTR repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR1M1 | 93.68% | 95 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Mouse | Or7e170 | 54% | 122 |
| Rat | Or7h7b | 55% | 122 |
| Cow | OR7A75 | 53% | 122 |
| Orang | OR7AC1P | 46% | 153 |
Sequence information
| Nucleotide sequence |
ATGGAACCAGGAAACCAAACCAGTGCATCTCAATTCATCCTCCTGGGACTGTCAGAAAAG CCGGAGCAGGAAACACTTCTCTTTTCTCTGTTCCTCTGCATGTACCTGGTACAGTCCTGG GGAACCTGCTCATCATCCTGGCCATCAGCATAGACTCCCACTTCCACACCCCCATGTACT TCTTCCTGGCCAACCTGTCCCTGATTGATTTCTGTCTGGCCACCAACACCATCCCCAAGA TGCTGGTGAGCCTTCAAACCGGAAGCAAGGCCATCTCTTATCCCTGATAATGCAAACATT CCTGGGCTCTCTATGGGGAAGCTGTGGCCCTGTGCCTGACCCCAAGGCACTGGGAGAGAA AGCCTTTCCTGACCCCAAGGTGTTACAGGAAAGGGGTCCAATCCAAATCCCAAGAGAGGG CTCTTGGATCTCAGGCAAGTCCACAAAGTGAAAACAAGTTTTT |
| Conceptual translation |
MEPGNQTSASQFILLGLSEKPEQETLLFSLFLCMYL/TVLGNLLIILAISIDSHFHTPM YFFLANLSLIDFCLATNTIPKMLVSLQTGSKAISYPXCKHSWALYGEAVALCLTPRHWE RKPFLTPRCYRKGV/IQIPREGSWISGKSTKXQVF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | C/G | 1000GP (YRI, YRI, YRI) | |
| 19 | 9,083,237 | 9,083,237 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 19 | 9,193,913 | 9,193,913 | SNP | G/A | rs2591615 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 137 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.