Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR1X1P Olfactory Receptor

Gene Symbol OR1X1P1 (View this gene in GeneCards)
Family 1
Subfamily X
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR5.2.1P, ORL3134
External Ids HGNC: 15062   ORDB: ORL3134   
Build #39 labels OR1X1P
Chromosomal location 5:176,006,145-176,007,389 (+)
Cluster 5@175
Synteny CLIC#0
Remarks Disrupted by Alu repeat

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR1X5P 92.89% 225

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR1X2 75% 312
Mouse Or1x2 70% 312
Rat Or1x2 68% 310
Cow OR1AB2 50% 306
Orang OR1D3 48% 305
Horse OR1AB17 49% 305
Chimp OR1X7P 88% 217

Expression evidences

Source Accession
GNF Atlas2 gnf1h04492_at

Sequence information

Nucleotide sequence GGGGGTAAAGAGAATGAGACAGGAGTTGGCGAGTTCCTCTTGCTCAGCATCACCAGTGAC
TCAGAGAAGCAGCAGGCCCTCTTCTGGCTCTTCCTGTGTATGCACTTAGTCACTGAGGCT
GGAAACACACCCATCATCCTGGGCATCGGCTCCAACCCTCGCCTGCACACCCCCACGTAC
TTCTTCACCCATCTCTCCTTTGTCAACATCTGCTTCATCACCAACCTGATCCCCAAGCTC
CTGGTCAACCATGTGGCAGGAACAGGGATGATCTCTATGGACGATCTCTTCTCCCCAGTG
CCTGACTCAGATGTACTTCCTCATCTCCTTTGCCAACGTGGACACCTTTCTGCTGGCCAT
CATGGCACTGGACCACTATGTGGCCATCTGCAGCGCCCTGCGGTACTGCTCCATCATCAC
CCCCGGCTCTGTCAGGGGCTGGCCGTGCTAGCGTGAGCAGGCTCCAGCCTCATCTCCCTG
GTCCACACGGTCATCATGAGCAGACTGGCCTTCTGCTCCTCCGCCCAGATTTCACACTTC
TACTGTGACGCCTACCTGCTCATGAAGATTGCCTGCTCACATACATGTCAATCAGCATGT
GTTCCTGGGGGCCGTGGTCCTGTTCCTGGCTCCCTGTGCGCTCATCTTGGTCTCCTACAT
CCGCATTGCTGCAGCCATCCTCCGGATTCCCTCTCCTACAAGAAGGCGCAAGGCATGTTC
CATATGTAGCTCCCACCTGTCTCTGGTCACCCTGTTCTATGGAACTGTCCTGGGGATCTG
CATATGACCCCCAGACTCCTTCTCAGCCCAGGACACCATAGCAACCATCATGTACACTGT
GGTGACCTCTATGCTAAACCCCTTCATCTACAGTCTGATGAACAAGGAGGTCCAGGAGGC
CGTGAGAAGGCTCTTCAGTAGGGGCTCACACTCATCATGGTGC
Conceptual translation GGKENETGVGEFLLLSITSDSEKQQALFWLFLCMHLVTEAGNTPIILGIGSNPRLHTPTY
FFTHLSFVNICFITNLIPKLLVNHVAGTGMITISSPQCLTQMYFLISFANVDTFLLAIMA
LDHYVAICSALRYCSIISPRLCQGLAVLAXGSSLISLVHTVIMSRLAFCSSAQISHFYC
DAYLLMKIACSNIHVNQHVFLGAVVLFLAPCALILVSYIRIAAAILRIPSPTRRRKACSI
CSSHLSLVTLFYGTVLGICIXPDSFSAQDTIATIMYTVVTSMLNPFIYSLMNKEVQEAV
RRLFSRGSHSSWC

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
5 175,433,425 175,433,424 Ins(2) -/TT rs35707333 (DbSNP)
5 175,433,594 175,433,593 Ins(2) -/TT rs72092216 (DbSNP)
5 175,433,424 175,433,423 Ins(2) -/TT rs35654165 (DbSNP)
5 175,433,435 175,433,434 Ins(2) -/TT rs72284127 (DbSNP)
5 175,433,599 175,433,598 Ins(6) -/TTTTTT rs56034362 (DbSNP)
5 175,433,876 175,433,876 SNP A/C rs13358386 (DbSNP)
5 175,434,140 175,434,140 SNP A/C rs71262952 (DbSNP)
5 175,433,212 175,433,212 SNP A/G rs58518346 (DbSNP)
5 175,433,507 175,433,507 SNP A/G rs57875594 (DbSNP)
5 175,433,193 175,433,193 SNP A/G rs57989738 (DbSNP)
5 175,434,037 175,434,037 SNP A/T rs71262950 (DbSNP)
5 175,434,062 175,434,062 SNP C/T rs71262951 (DbSNP)
5 175,433,965 175,433,965 SNP C/T rs55711720 (DbSNP)
5 175,433,993 175,433,993 SNP C/T rs71262949 (DbSNP)
5 175,433,600 175,433,600 SNP G/T rs7721007 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
5 175,346,628 175,764,368 CopyNumber Variation_2610 (DGV)
5 175,405,378 175,752,902 CopyNumber Variation_3588 (DGV)
5 175,346,790 175,757,716 CopyNumber Variation_8503 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.