OR2A41P Olfactory Receptor
| Gene Symbol | OR2A41P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 31246 GeneBank: NG_004408 |
| Build #39 labels | |
| Chromosomal location | 7:144,077,393-144,077,854 (+) |
| Cluster | 7@144 |
| Synteny | CLIC#16 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2A25 | 90% | 40 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
AGTTCTCTGAAAGAGTAATGACTATTTTAAAATACATGGATAAATACAATTCAAAATTGC TAAAATTCATATATGTGTGTGTATATATTACACACACACATACACACACACATCAGTGCT AGGTCCTGGAAACAAAAGGACGAATAGGGCACATTTCCTATTACTTTATTCATGTGTAGT AGGAGAATTAAATGGATATATGATGGAAATTATCAACTTATATAATAAGTTAATAACTGA GCTCTGCCCAGGATGCTATTGTAGCCCAGAGGAAGGATAACTCCCCCAGAATGGGAGTGT TTCAGTAAGACTTCCTGGAGTGGAAGTCTGCATCACTCTGGCATTGACTTCCTGGATTTT AGGAGTCTTACTGGCCCTTGTCCATCTAGTGTTACTGCTACCACTGTCCTTCTGTGGACC CCAGAAAGTTAATCTTAAGTAAGCATAAGTAAGAGTTAGCCA |
| Conceptual translation |
VLXSNDYFKIHGXQFKIAKIHICVCIYYTHTYTHTSVLGPGNKRTNRAHFLLLYSCVV GELNGYM\KLSTYIISXLSSAQDAIVAQRKDNSPRMGVFQXFLEW/VCITLALTSW ILGVLLALVHLVLLLPLSFCGPQKVN Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 7 | 100 | -100 | SNP | A/T | 1000GP (YRI) | |
| 7 | 143,774,642 | 143,774,641 | Ins(1) | -/C | rs35597072 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 7 | 143,147,775 | 144,368,638 | CopyNumber | Variation_3708 (DGV) |
| 7 | 143,217,296 | 144,074,520 | CopyNumber | Variation_32962 (DGV) |
| 7 | 143,545,719 | 143,874,190 | CopyNumber | Variation_53583 (DGV) |
| 7 | 143,572,286 | 143,866,532 | CopyNumber | Variation_8581 (DGV) |
| 7 | 143,742,520 | 143,847,474 | CopyNumber | Variation_4570 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.