OR2AD1P Olfactory Receptor
| Gene Symbol | OR2AD1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | AD |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | dJ25J6.1, hs6M1-8P, HsOR6.3.1P, ORL3157 |
| External Ids | HGNC: 14749 GeneBank: NG_002239 ORDB: ORL3157 |
| Build #39 labels | OR2AD1P |
| Chromosomal location | 6:29,026,656-29,027,607 (-) |
| Cluster | 6@29 |
| Synteny | CLIC#12 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2G3 | 58.36% | 305 |
| OR2W1 | 58.03% | 305 |
| OR2W6P | 60.7% | 313 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2AD2 | 78% | 314 |
| Mouse | Or2ad1 | 81% | 313 |
| Rat | Or2ad1 | 79% | 310 |
| Cow | OR2AD1 | 83% | 314 |
| Cow | OR2AD1B | 82% | 307 |
| Orang | OR2W4 | 59% | 305 |
| Horse | OR2AD1 | 82% | 314 |
| Horse | OR2AD1C | 82% | 314 |
| Horse | OR2AD1D | 81% | 314 |
| Chimp | OR2W6 | 61% | 313 |
Sequence information
| Nucleotide sequence |
ATGGAAACAAGCAGTGTAAGTTCTGGAACAGATTTCATCCTTCTGGGGTTTTCTGATCGA CCCCAATTAGAGCACATCATCTCAGTGGTTGTCTTCATCATCTATATTGTGACTCTGGTA GGAAATACAACCATCATTCTTGTATCTTATCTAGACACCCAGCTCCATACCTTCATGTAT TTTTTCTTATCCAATTTGTCTTTCTTGGACCTCTGTTATACAACTAGCATTATCCCCCAG ATGCTGGCAAATCAATGGGGCCCAAAAAAATCTATTACTTATGGAGGGTGTGTACTCCAA TTCTTTTTTGTCCTTGACTTGGGAGCCACAGAATGTCTTCTGTTGGCTGTGATGGCCTAT GATCGTTATGCTGCTGTCTGTCAACCTCTTCACTACACCTTAAAATGCACCCTCAGCTTT GCCACTGCCTGGTTGAGTGGTCTTGCCAGTGCCTTAATTGTTTGCTCCTTGACTTTGAAG TTGCCAAGATGTGGGCACCGGGAAGTGGATAATTTTTTCTGTGAGATGCCAGCATTGATC AAGATGGCTTGTGTCTATTCAAAAGTAATTGAGATTGTTGTCTTTGCTTTCGGAGTGGTA TTTCTTTTCGTACCTCTATCACTAATTCTTATCTCATATGGAGTTATCACTCAAGCTGTA ATGAGGATCAAGTCAGCAACAAGGTTGCAAAAGATCCTTAATACATGTGGCTCCCACCTC ACAGTAGTAATTCTGTTTTATGGAACAATCATTTATATATACATGAAGCCACAGAATACC ATATCCCAAGATGAAGGGAAGTTCTTCACTCTTTTACACAATCATCACACCCAGCCTTAA CCTTCCCATCTACACTTTAAGAAACAAAGATGTAAAGAGTGCACTGAAGAGAATACTGTG GATGAAAAAATCTTCAGCAGAATCATGAATTAGATGGAAAAAAGTAGAATGT |
| Conceptual translation |
METSSVSSGTDFILLGFSDRPQLEHIISVVVFIIYIVTLVGNTTIILVSYLDTQLHTFMY FFLSNLSFLDLCYTTSIIPQMLANQWGPKKSITYGGCVLQFFFVLDLGATECLLLAVMAY DRYAAVCQPLHYTLKCTLSFATAWLSGLASALIVCSLTLKLPRCGHREVDNFFCEMPALI KMACVYSKVIEIVVFAFGVVFLFVPLSLILISYGVITQAVMRIKSATRLQKILNTCGSHL TVVILFYGTIIYIYMKPQNTISQDEGKF\LFYTIITPSLNLPIYTLRNKDVKSALKRIL WMKKSSAESXRWKKVEC Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 6 | 28,994,688 | 28,994,687 | Ins(1) | -/G | rs34779329 (DbSNP) | |
| 6 | 28,994,562 | 28,994,562 | SNP | A/G | rs7741941 (DbSNP) | |
| 6 | 28,994,570 | 28,994,570 | SNP | A/G | rs7741520 (DbSNP) | |
| 6 | 28,994,989 | 28,994,989 | SNP | G/A | rs2269554 (DbSNP) | |
| 6 | 29,026,793 | 29,026,793 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 6 | 29,026,954 | 29,026,954 | SNP | T/C | 1000GP (CEU) | |
| 6 | 29,027,117 | 29,027,117 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 6 | 29,027,212 | 29,027,212 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 6 | 29,027,466 | 29,027,466 | SNP | C/A | 1000GP (CEU) | |
| 6 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 70 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.