OR2B3 Olfactory Receptor
| Gene Symbol | OR2B31 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | B |
| Pseudogene | No |
| CORP pseudogene probability score | 0.99 (pseudogene) |
| Aliases | OR6-4, hs6M1-1, OR6-14, dJ80I19.1, HsOR6.3.4, ORL694, ORL693 |
| External Ids | HGNC: 8238 GeneBank: AF399632, BK004436, HSA302537-HSA302546, NM_001005226 ORDB: ORL694, ORL693 |
| Build #39 labels | OR2B3 |
| Chromosomal location | 6:29,086,310-29,087,248 (-) |
| Cluster | 6@29 |
| Synteny | CLIC#12 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2B2 | 72.64% | 307 |
| OR2B6 | 70.61% | 313 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2B2 | 77% | 313 |
| Mouse | Or2b2 | 74% | 313 |
| Rat | Or2b2 | 73% | 313 |
| Cow | OR2B3B | 88% | 313 |
| Orang | OR2B6 | 71% | 313 |
| Horse | OR2B3C | 91% | 313 |
| Chimp | OR2B2P | 72% | 313 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | BC136818 |
| GNF Atlas2 | gnf1h10892_at |
Sequence information
| Nucleotide sequence |
ATGAATTGGGAAAATGAGAGCTCCCCAAAAGAGTTTATACTACTTGGCTTCTCAGATAGG GCTTGGCTACAAATGCCCCTTTTTGTGGTCCTGTTAATATCATACACAATCACCATATTT GGCAATGTGTCCATCATGATGGTGTGCATTCTGGATCCCAAACTTCATACTCCCATGTAT TTCTTTCTCACTAATCTCTCCATCTTAGATCTCTGCTATACCACAACTACAGTCCCTCAT ATGTTGGTAAATATTGGTTGCAACAAAAAGACCATCAGCTATGCTGGCTGTGTGGCCCAC CTCATCATCTTCCTGGCCCTAGGTGCTACAGAGTGTCTCCTTCTGGCTGTTATGTCCTTT GACAGATATGTGGCTGTTTGCAGACCCCTCCACTATGTAGTCATCATGAATTATTGGTTC TGCCTAAGGATGGCAGCCTTCTCATGGCTCATTGGTTTCGGCAACTCAGTGCTGCAGTCT TCCTTGACTCTTAACATGCCACGCTGTGGTCACCAGGAAGTGGACCACTTTTTCTGTGAG GTGCCTGCACTTCTCAAGTTGTCATGTGCTGACACAAAGCCTATTGAGGCTGAGCTCTTC TTCTTTAGTGTACTAATTCTTCTAATTCCAGTGACATTGATCCTCATCTCCTATGGCTTC ATAGCTCAAGCAGTATTAAAAATCAGGTCAGCAGAAGGACGGCAAAAAGCATTTGGGACA TGTGGGTCCCACATGATTGTGGTGTCCCTCTTTTATGGAACAGCCATTTATATGTATCTT CAACCACCTTCATCCACCTCTAAGGACTGGGGAAAGATGGTTTCCCTCTTCTATGGAATC ATCACATCCATGTTGAACTCCCTCATCTACAGCCTTAGAAATAAAGATATGAAGGAGGCC TTCAAGAGGCTGATGCCAAGAATCTTTTTCTGTAAGAAA |
| Conceptual translation |
MNWENESSPKEFILLGFSDRAWLQMPLFVVLLISYTITIFGNVSIMMVCILDPKLHTPMY FFLTNLSILDLCYTTTTVPHMLVNIGCNKKTISYAGCVAHLIIFLALGATECLLLAVMSF DRYVAVCRPLHYVVIMNYWFCLRMAAFSWLIGFGNSVLQSSLTLNMPRCGHQEVDHFFCE VPALLKLSCADTKPIEAELFFFSVLILLIPVTLILISYGFIAQAVLKIRSAEGRQKAFGT CGSHMIVVSLFYGTAIYMYLQPPSSTSKDWGKMVSLFYGIITSMLNSLIYSLRNKDMKEA FKRLMPRIFFCKK Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 6 | 29,087,137 | 29,087,137 | NS | T/A | T/S | 1000GP (CEU) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| D269Y | T38S | Y35H | % Freq | CORP | |
|---|---|---|---|---|---|
| 1 | D | T | Y | 98.58 | 0.996 |
| 2 | D | S | Y | 0.77 | 0.996 |
| 3 | D | T | H | 0.55 | 0.999 |
| 4 | Y | T | Y | 0.11 | 0.996 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR2B3.aApr07-unspliced | main_exon | 3UTR | chr6 | 29,086,307 | 29,086,310 | - |
| CDS | chr6 | 29,086,310 | 29,087,248 | - | ||