OR2E1P Olfactory Receptor
| Gene Symbol | OR2E1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | hs6M1-9, HS29K1, HSNH0569I24, HsOR6.2.9P, ORL3169 |
| External Ids | HGNC: 15507 GeneBank: NG_004088 ORDB: ORL3169 |
| Build #39 labels | OR2E1P |
| Chromosomal location | 6:28,455,638-28,456,111 (-) |
| Cluster | 6@28b |
| Synteny | CLIC#12 |
| Remarks | Disrupted by LTR repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2B11 | 52.29% | 153 |
| OR2B4P | 51.59% | 157 |
| OR2N1P | 50.65% | 154 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2B28P | 69% | 157 |
| Mouse | Or2b28 | 82% | 154 |
| Rat | Or2b11 | 56% | 153 |
| Cow | OR2B28 | 81% | 154 |
| Orang | OR2C1 | 54% | 154 |
| Horse | OR2B28 | 80% | 154 |
| Chimp | OR2B11 | 53% | 153 |
Sequence information
| Nucleotide sequence |
ATGGGCTTTGTCAAATATCCATGGCTGGATTTTCTTCTCTTCTGTGTCCTCTTGACCTTC TACATGTTCACATTGTTGGGAAATAGTGCTATTATTCTGGTCTCTCAACTAGATTCCCAA CTTCATAGTCCTATGTATTTCCTTCTCACCAGTCTTTCCGTCTTATATCTCTGTTTCACC ACCACAACAGTACCTCAAATGCTGTTCAATTTAGGGGGCCCAACAAGAACATCACTTAAA TAGGCTGTATGGCCCAGGCCTATGTATTTCACTGGCTAGCCTGTATTGAATGTGTCCTTC TTGGCATCGTGGCCTTAGACTGCTATGTGGCTGTCTGTAAGCCTCCAAGGTACACTATAA TCATAGACCATAAGGTCTGCCTGCACCTGTCCAGCACTGCTTGGCTAATTGGTCTGGCCA ATTCACTGCTGCAGTCAACAATCACAATTCAGTTGCCCCTGTAGAGGTGTATAG |
| Conceptual translation |
MGFVKYPWLDFLLFCVLLTFYMFTLLGNSAIILVSQLDSQLHSPMYFLLTSLSVLYLCFT TTTVPQMLFNLGG/NKNITXGCMAQAYVFHWLACIECVLLGIVALDCYVAVCKPPRYT IIIDHKVCLHLSSTAWLIGLANSLLQSTITIQLPLXCI Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 6 | 28,423,880 | 28,423,880 | SNP | A/G | rs73740627 (DbSNP) | |
| 6 | 28,423,603 | 28,423,603 | SNP | A/G | rs2531811 (DbSNP) | |
| 6 | 28,423,599 | 28,423,599 | SNP | C/T | rs7766749 (DbSNP) | |
| 6 | 28,423,510 | 28,423,510 | SNP | C/T | rs2859370 (DbSNP) | |
| 6 | 28,455,733 | 28,455,733 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 6 | 28,455,822 | 28,455,822 | SNP | T/C | 1000GP (CEU) | |
| 6 | 28,455,826 | 28,455,826 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 6 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.