OR2G1P Olfactory Receptor
| Gene Symbol | OR2G1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OST619, dJ974I11.4, OR6-22, hs6M1-25, HsOR6.3.11P, ORL3156 |
| External Ids | HGNC: 8251 GeneBank: BK004668, NG_004689 ORDB: ORL3156 |
| Build #39 labels | OR2G1P |
| Chromosomal location | 6:29,229,230-29,230,220 (-) |
| Cluster | 6@29 |
| Synteny | CLIC#12 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2G3 | 63.58% | 302 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2W3 | 58% | 312 |
| Mouse | Or2g1 | 83% | 308 |
| Rat | Or2g1 | 83% | 308 |
| Cow | OR2G1 | 84% | 310 |
| Orang | OR2G6 | 60% | 302 |
| Horse | OR2G1 | 83% | 311 |
| Chimp | OR2G3 | 64% | 302 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BX100796 |
Sequence information
| Nucleotide sequence |
ATGGCCAACACATTATCCTCCCTGAATTCTTGTAATGTGTTTCTCCTAGTTCTGAACAGG GTGATGGGCATGACCAACAGCAGTGTCAAGGGAGACTTCATCCTGGTGGGTTTCTCTCAT CAGCCCCACCTGGAAAAGATCCTCTTTGTGGCTGTTTTGATATCCTATCTCCTTACCCTT GTGGGAAATACAGTAATTATTCTGATCTGCTCTGTAGACCCTAAACTCAAGACACCCATG TATTTTTTCTTACTCACCTCTCCTTAGTTGATATCTGTTTTACCACCAGTATTGTCCCCC AGCTGCTGTGGAACCTAAAAGGACCTGACAAAACAATCACATTCCTGGGTTGTGTCATCC AGCTCTACATCTCCCTGGCATTGGGCTCCACTGAGTGTGTCCTCCTGGCTGTAATGGCTT TTGATCGCTATGCTGCAGTTTGCAAACCTCTCCACTATACCGCCGTAATGAACCCTCAGC TGTGCCAGGCTCTGGCAGGGGTTGCGTGGCTGAGTGGAGTGGGAAACACTCTTATCCAGG GCACTGTCACCCTCTGGCTTCCTCGCTGTGGACACCGATTGCTCCAACATTTCTTCGTGA GGTACCCTCCATGATTAAGCTTGCATGTGTGGACATCCATGATAATGAGGTTCAGCTCTT TGTTGCTTCACTGGTCTTGCTCCTCTTGCCCTTAGTGCTAATACTGCTGTCCTATGGACA TATAGCCAAGGTGGTCATAAGGATCAAGTCAGTCCAGGCCTGGTGCAAAGGCCTGGGGAC ATGTGGATCCCATTTGATAGTAGTGTCCCTCTTCTGTGGGACCATCACAGCTGTCTACAT CCAGTCCAACAGTTCTTATGCCCATGCTCATGGGAAGTTCATCTCCCTCTTCTATACAGT TGTGACCCCGACCCTCAATCCTCTCATCTACACACTGAGGAATAATGACGTGAAAGGAGC ACTGCGATTATTTAACAGAGACTTAGGCACA |
| Conceptual translation |
MANTLSSLNSCNVFLLVLNRVMGMTNSSVKGDFILVGFSHQPHLEKILFVAVLISYLLTL VGNTVIILICSVDPKLKTPMYFFL/HLSLVDICFTTSIVPQLLWNLKGPDKTITFLGCV IQLYISLALGSTECVLLAVMAFDRYAAVCKPLHYTAVMNPQLCQALAGVAWLSGVGNTLI QGTVTLWLPRCGHRLLQHFF/EVPSMIKLACVDIHDNEVQLFVASLVLLLLPLVLILLS YGHIAKVVIRIKSVQAWCKGLGTCGSHLIVVSLFCGTITAVYIQSNSSYAHAHGKFISLF YTVVTPTLNPLIYTLRNNDVKGALRLFNRDLGT Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 6 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI) | |
| 6 | 29,197,720 | 29,197,720 | SNP | A/C | rs58390506 (DbSNP) | |
| 6 | 29,229,686 | 29,229,686 | SNP | A/C | 1000GP (CEU) | |
| 6 | 29,229,798 | 29,229,798 | SNP | C/A | 1000GP (CHBJPT) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.