OR4A11P Olfactory Receptor
| Gene Symbol | OR4A11P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | A |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR11.11.1P, ORL3591 |
| External Ids | HGNC: 15148 GeneBank: NG_004332 ORDB: ORL3591 |
| Build #39 labels | OR4A11P |
| Chromosomal location | 11:55,318,560-55,319,477 (+) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4A13P | 82.78% | 302 |
| OR4A40P | 85.33% | 300 |
| OR4A45P | 83.22% | 304 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4A39 | 76% | 299 |
| Mouse | Or4a39 | 77% | 302 |
| Rat | Or4a77c | 73% | 303 |
| Cow | OR4A2 | 70% | 299 |
| Orang | OR4A47P | 65% | 302 |
| Horse | OR4A124 | 74% | 303 |
| Chimp | OR4A40CP | 85% | 306 |
| Chimp | OR4A40BP | 86% | 302 |
| Chimp | OR4A13P | 85% | 302 |
Sequence information
| Nucleotide sequence |
ATGAGACAGAATAACAGTAGTACAGAATTTGTTCTCCTGGGCTTTTCTCAGGATCCTGAT GTGCAAAATGCGCTATTTGTCATGTTTTTACTGACATACATTGTGACAATGGTGGGGAAC CTACTCATTGTGGTGACTATTATTGCCAGCCCTTCCTTGGGCTCCCCAATGTACTTTTTC CTTGCCCACCTGTCATTTATAGATGCTGTGTATTCCACCACCATTTCTCCTGTATTGATT GTAGACTTACTCTGTGACAAAAAGACGATTTCCTTCTGAGCTTGCATGGGACAACTGTTT ATAGACCACTTATTTGGTGGTTCTGAGGTCTTCCTTCTGGTGGTGATGGCCTGTGATCGC TGTGTGGCCATCTGTAAGCCACTGCACTATTTGACCATCATGAATCGACAGGTTTGCATT CTTCTCTTGGTGTTGGCTGTGACTGGAGGTTTTGTGCATCCTGTATTTCAAGTTGTTGTT GTGTACAGTCTCCCTTTCTGTGGCCCCAATGTCATTGACCACTTTTTCTGTGACATATAC CCTTTATTTGGAACTGGCATGCACTGACACCTACTTTATAGGCCTCACTGTGGTTTTCAA TGGTGGAGCAATGCGTATGGTCATCCTCACCCTTCTACTAGTCTTCTATGGAGTCATCCT AAACTCCCTTAAAACTTACAGTCAGGAAGGGAGGCATAAAGCCCTGTCTACCTGCAGCTC CCATTTTACCGTGGTTATCTTGTTTTTTGCTTCCTGTATTTTCATATATGTTAGACCTGT TTCAAATTTTCTGTTGATAAATTCATGACTGTGTTTTATACGGTTATCACACCCATGTTG AATCCTTTTATATGCATGTTGAGAAATTCAGAGATGAGAAATGCTATAGAAAAACTCCTG TGTAAAATGAACTGTAGT |
| Conceptual translation |
MRQNNSSTEFVLLGFSQDPDVQNALFVMFLLTYIVTMVGNLLIVVTIIASPSLGSPMYFF LAHLSFIDAVYSTTISPVLIVDLLCDKKTISFXCMGQLFIDHLFGGSEVFLLVVMACDR CVAICKPLHYLTIMNRQVCILLLVLAVTGGFVHPVFQVVVVYSLPFCGPNVIDHFFCDIY PL\ELACTDTYFIGLTVVFNGGAMRMVILTLLLVFYGVILNSLKTYSQEGRHKALSTCS SHFTVVILFFASCIFIYVRPVSNF/VDKFMTVFYTVITPMLNPFICMLRNSEMRNAIEK LLCKMNCS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 55,086,384 | 55,086,384 | SNP | A/G | rs72480347 (DbSNP) | |
| 11 | 55,086,293 | 55,086,293 | SNP | C/T | rs1216159 (DbSNP) | |
| 11 | 55,086,394 | 55,086,394 | SNP | G/A | rs72486118 (DbSNP) | |
| 11 | 55,086,760 | 55,086,760 | SNP | G/T | rs1216160 (DbSNP) | |
| 11 | 55,086,595 | 55,086,595 | SNP | G/T | rs56073637 (DbSNP) | |
| 11 | 55,086,267 | 55,086,267 | SNP | G/T | rs72480331 (DbSNP) | |
| 11 | 55,318,600 | 55,318,600 | SNP | G/T | 1000GP (CEU) | |
| 11 | 55,318,817 | 55,318,817 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 55,318,884 | 55,318,884 | SNP | G/A | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | G/T | 1000GP (YRI, YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 54,835,623 | 55,879,426 | CopyNumber | Variation_8690 (DGV) |
| 11 | 55,083,434 | 55,156,434 | CopyNumber | Variation_48825 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.