Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR4A45P Olfactory Receptor

Gene Symbol OR4A45P1 (View this gene in GeneCards)
Family 4
Subfamily A
Pseudogene Yes
CORP pseudogene probability score
Aliases HsOR11.8.18P
External Ids HGNC: 31264   
Build #39 labels
Chromosomal location 11:48,579,436-48,580,351 (+)
Cluster 11@48
Synteny CLIC#26
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR4A11P 83.22% 304
OR4A13P 81.94% 299
OR4A40P 81.91% 304

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR4A39 74% 297
Mouse Or4a39 75% 300
Rat Or4a77e 71% 303
Cow OR4A2 69% 300
Orang OR4A47P 64% 300
Horse OR4A124 75% 303
Chimp OR4A40CP 83% 306
Chimp OR4A13P 84% 299
Chimp OR4A13 83% 299

Sequence information

Nucleotide sequence ATGAGACAAAATAACAGTATTACAGAATTTGTCTTCCTGGGCTTCTCTCAGGATCCTGAT
GTGCAAAATGCATTATTTGTCATGTTTTTACTCACATACATTGTGTCAGTGGTGGGGAAC
CTACTCATTGTCATGACTATTATTGCCAGCCCTTCCTTGGGCTCCCCAGTGTACTTCTTC
CTCACCTGCCTGTCATTTATAGAGGCTGTGTATTCCACCACCATTTCTCCTGTATTGATT
GTCGACTTCCTCTGTGATAAAAAGACTATTTCCTTCCGAGCTTGCATGGGCCAGCTGTTT
ATAGACCACTTGTTTGGTGGTGCAGATCTTTCTTCTGGTGATGATGGCCTGGGATCGCTA
CATGGCCATCTGTAAGCCACTGCACTATTTGACCATCATGAATCAACAGGTTTGCATCCT
TCTGTTTGTGTTGGCCATGACTGGAGGTTTTGTGCATTCTGTGTTTCAAATTGTTGTTGT
ATACTGTCTCCCTTTCTGTGGCCCGAATGCCATTGACCATTTTTACTGTGATATGTACCC
ATTATTGGAACTGGCATGCACTGACACCTACTTTATAGGTCTCACTGTGGTTTTCAATGG
TGGAGCAATCTGTATGGTCACCTTCACCCTTCTACTAATCTCATATAGGGTCATCCTAAA
CTCCCTTAAAACTTACAGTCAGGAAAGGAGGCATAAAGCCCTGTCTACCTGCAGATCCCA
CATTACCGTGGTTGTCCTGTTTTTTGTTCCCTGTATTTTCATGTATGTTAGACCTGTTTC
AAACTTTTCTATTGATAAATTCCTCACTGTGTTTTATGCAGTTATCACACCCATGTTGAA
TCCTTTTATATACGCGTTGAGAAATTCAGAGATGAGGACTGCTATAGAAAAACTCTTTGG
TACAATGAGCTATAAT
Conceptual translation MRQNNSITEFVFLGFSQDPDVQNALFVMFLLTYIVSVVGNLLIVMTIIASPSLGSPVYFF
LTCLSFIEAVYSTTISPVLIVDFLCDKKTISFRACMGQLFIDHLFGG\IFLLVMMAWDR
YMAICKPLHYLTIMNQQVCILLFVLAMTGGFVHSVFQIVVVYCLPFCGPNAIDHFYCDMY
PLLELACTDTYFIGLTVVFNGGAICMVTFTLLLISYRVILNSLKTYSQERRHKALSTCRS
HITVVVLFFVPCIFMYVRPVSNFSIDKFLTVFYAVITPMLNPFIYALRNSEMRTAIEKLF
GTMSYN

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
11 100 -100 SNP C/T 1000GP (YRI, YRI, YRI)
11 48,600,432 48,600,432 large insertion 29799bp insertion rs72486186 (DbSNP)
11 48,600,857 48,600,857 large insertion 3426bp insertion rs67661836 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
Deletion 251 (Hasin)
11 48,303,671 48,863,606 CopyNumber Variation_3848 (DGV)
11 48,346,202 48,972,502 CopyNumber Variation_9183 (DGV)
11 48,365,757 49,068,634 CopyNumber Variation_2922 (DGV)
11 48,479,497 48,689,328 CopyNumber Variation_5013 (DGV)
11 48,599,092 48,604,358 CopyNumber Variation_23021 (DGV)
11 48,599,837 48,604,891 CopyNumber Variation_22552 (DGV)
11 48,600,024 48,606,042 CopyNumber Variation_101214 (DGV)
11 48,600,718 48,604,528 CopyNumber Variation_61137 (DGV)
11 48,600,815 48,604,352 CopyNumber Variation_43536 (DGV)
11 48,600,856 48,604,301 CopyNumber Variation_65939 (DGV)
11 48,600,857 48,604,282 CopyNumber Variation_5628 (DGV)
11 48,600,858 48,604,281 CopyNumber Variation_43820 (DGV)
11 48,600,888 48,603,903 Deletion #6 (Waszak)
11 48,600,961 48,604,097 CopyNumber Variation_85760 (DGV)
11 48,601,601 48,604,097 CopyNumber Variation_75638 (DGV)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.