OR4A7P Olfactory Receptor

Gene Symbol	OR4A7P¹ (View this gene in GeneCards)
Family	4
Subfamily	A
Pseudogene	Yes
CORP pseudogene probability score
Aliases	OR11-109, HsOR11.10.3P, ORL3585
External Ids	HGNC: 15164 GeneBank: BK004701, NG_004236 ORDB: ORL3585
Build #39 labels	OR4A7P
Chromosomal location	11:54,692,450-54,693,359 (-)
Cluster	11@51
Synteny	CLIC#26
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol	Percent	Length
OR4A43P	91.75%	303

Most Similar ORs in other species (Orthologs)

Specie	Symbol	Percent	Length
Dog	OR4A39	72%	299
Mouse	Or4a39	73%	302
Rat	Or4a77e	70%	302
Cow	OR4A2	67%	300
Orang	OR4A47P	63%	302
Horse	OR4A124	74%	300
Chimp	OR4A43P	89%	303

Sequence information

Nucleotide sequence

ATGAGACTGAGTAGCGATGTTACAGCATTTGTCCTCCTAGGCCTTACTCAGGATCCTGAT
GTGTAAAATGCATTATTTGTCGTACATTTACTCACATACATTATGACTATGGTGGGGAAC
CTGCCCATTGTGGTGACTATTATTGCCACCCCCACCTTAGGCTCCCCAGTGTACTTCTTC
ATTGTCTGCTTGTCATTTATAGATGTTGTGTATTCCACCACCATTCCTCCCAAATTGATT
GTAAGCTATCTCCATGATAAAAAGACTATTTCCTTCCGAGCTTGCATGGGTCAGCCCTTT
TATAGACCACTTAGTTGGTGGTGCTGAGGCCTTCATTCTGTTGGTGATGGCCTATAATCG
CTATGTAGCCATCTGTAAGCCACTGCACTATTTCACCATCATGAATTGACAGGTTTGCAT
CCTTCTGTTGGTGGTGGCTGTCACTGCGGGTTTTGTGCATTCTGTGTTTCAAATTTTAGT
TGCGTACAGTCTCCTTTTCTGTGGTCCCAATATCATTGACCACTTTTTCTGTGACATGTA
CCCATTATTGGAACTGGCACACACTGACACCTACTTTATAGGCCTCACTGTTGTTGCCAA
TGGTGGAGGAATCTGTATGGTCTTGTTCATCCTTCTACTAATCTCCTGTGGGGTCATCCT
AATCTCCCTTAAAACTTATAGTCAGGAAGGGAGGCATAAAGCCCTGTCTACCTGCAGCTC
CCACATTACCGTGGTTGTCCTGTTTTTTGTTCCCTGTATTTTCCTGTATGTTAGACCTGT
TTCAAACTTTCCTATTAATAAATTCATTACTGTGTTTTATACAGTTATCACACCCATGTT
GAATCCATTAATATACACATTGAGAAACTGAGAGATGAAAAATGCTATAGGAAACCTCTG
GTGTAAATAT

Conceptual translation

MRLSSDVTAFVLLGLTQDPDVXALFVVHLLTYIMTMVGNLPIVVTIIATPTLGSPVYFF
IVCLSFIDVVYSTTIPPKLIVSYLHDKKTISFRACMGQPF\DHLVGGAEAFILLVMAYN
RYVAICKPLHYFTIMNXVCILLLVVAVTAGFVHSVFQILVAYSLLFCGPNIIDHFFCDM
YPLLELAHTDTYFIGLTVVANGGGICMVLFILLLISCGVILISLKTYSQEGRHKALSTCS
SHITVVVLFFVPCIFLYVRPVSNFPINKFITVFYTVITPMLNPLIYTLRNXMKNAIGNL
WCKY

Protein domains and features

Variations - SNPs

Chr	Start	End	Type	Variation	SNP IDs
11	100	-100	SNP	A/T	1000GP (YRI, YRI, YRI, YRI)
11	51,411,978	51,411,978	large insertion	14018bp insertion	rs72488333 (DbSNP)
11	51,411,984	51,411,984	large insertion	14012bp insertion	rs72488332 (DbSNP)
11	51,411,989	51,411,989	large insertion	14007bp insertion	rs72488331 (DbSNP)
11	51,425,933	51,425,933	SNP	A/T	rs17156300 (DbSNP)
11	51,425,975	51,425,975	SNP	C/T	rs484052 (DbSNP)
11	51,426,023	51,426,023	SNP	A/T	rs72486117 (DbSNP)
11	51,426,066	51,426,066	SNP	G/T	rs5012446 (DbSNP)
11	51,426,071	51,426,071	SNP	A/C	rs5012447 (DbSNP)
11	51,426,095	51,426,095	SNP	A/G	rs5012448 (DbSNP)
11	51,426,096	51,426,096	SNP	C/T	rs5012449 (DbSNP)
11	51,426,182	51,426,182	SNP	C/T	rs5000498 (DbSNP)
11	51,426,207	51,426,207	SNP	A/C	rs5000499 (DbSNP)
11	51,426,238	51,426,238	SNP	A/C	rs5000500 (DbSNP)
11	51,426,239	51,426,239	SNP	A/T	rs5000501 (DbSNP)
11	51,426,461	51,426,461	SNP	A/G	rs561121 (DbSNP)
11	51,426,513	51,426,513	SNP	C/T	rs510697 (DbSNP)
11	51,426,572	51,426,572	SNP	A/C	rs11246555 (DbSNP)
11	51,426,624	51,426,624	SNP	A/G	rs61891390 (DbSNP)
11	51,426,645	51,426,645	SNP	A/G	rs17569863 (DbSNP)
11	51,426,661	51,426,661	SNP	C/T	rs61891391 (DbSNP)
11	54,692,601	54,692,601	SNP	G/T	1000GP (CEU)
11	54,692,618	54,692,618	SNP	C/T	1000GP (CEU)
11	54,692,634	54,692,634	SNP	A/G	1000GP (CEU)
11	54,692,707	54,692,707	SNP	A/C	1000GP (CEU, CHBJPT)
11	54,692,766	54,692,766	SNP	C/T	1000GP (CEU, CHBJPT)
11	54,693,046	54,693,046	SNP	G/A	1000GP (CEU)
11	54,693,072	54,693,072	SNP	A/C	1000GP (CEU, CHBJPT)
11	54,693,256	54,693,256	SNP	A/T	1000GP (CEU, CHBJPT)

Variations - CNVs

Chr	Start	End	Type	Sources
11	51,192,824	51,563,636	CopyNumber	Variation_8689 (DGV)
11	51,228,146	51,525,878	CopyNumber	Variation_48823 (DGV)
11	51,372,036	51,529,002	CopyNumber	Variation_53111 (DGV)
11	51,423,920	51,426,929	Deletion	#273 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.

HORDE

Search Olfactory receptors